Literature DB >> 18675311

In silico study of kinetochore control, amplification, and inhibition effects in MCC assembly.

Bashar Ibrahim1, Eberhard Schmitt, Peter Dittrich, Stephan Diekmann.   

Abstract

Eukaryotic cells rely on a surveillance mechanism, the "Spindle Assembly Checkpoint"SACM in order to ensure accurate chromosome segregation by preventing anaphase initiation until all chromosomes are correctly attached to the mitotic spindle. In different organisms, a mitotic checkpoint complex (MCC) composed of Mad2, Bub3, BubR1/Mad3, and Cdc20 inhibits the anaphase promoting complex (APC/C) to initiate promotion into anaphase. The mechanism of MCC formation and its regulation by the kinetochore are unclear. Here, we constructed dynamical models of MCC formation involving different kinetochore control mechanisms including amplification as well as inhibition effects, and analysed their quantitative properties. In particular, in this system, fast and stable metaphase to anaphase transition can only be triggered when the kinetochore controls the Bub3:BubR1-related reactions; signal amplification and inhibition play a subordinate role. Furthermore, when introducing experimentally determined parameter values into the models analysed here, we found that effective MCC formation is not combined with complete Cdc20 sequestering. Instead, the MCC might bind and completely block the APC/C. The SACM might function by an MCC:APC/C complex rearrangement.

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Year:  2008        PMID: 18675311     DOI: 10.1016/j.biosystems.2008.06.007

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  10 in total

1.  Systems Biology Modeling of Five Pathways for Regulation and Potent Inhibition of the Anaphase-Promoting Complex (APC/C): Pivotal Roles for MCC and BubR1.

Authors:  Bashar Ibrahim
Journal:  OMICS       Date:  2015-04-14

2.  Using default constraints of the spindle assembly checkpoint to estimate the associated chemical rates.

Authors:  Khanh Dao Duc; David Holcman
Journal:  BMC Biophys       Date:  2012-01-19       Impact factor: 4.778

3.  Spindle assembly checkpoint is sufficient for complete Cdc20 sequestering in mitotic control.

Authors:  Bashar Ibrahim
Journal:  Comput Struct Biotechnol J       Date:  2015-04-09       Impact factor: 7.271

4.  Active transport can greatly enhance Cdc20:Mad2 formation.

Authors:  Bashar Ibrahim; Richard Henze
Journal:  Int J Mol Sci       Date:  2014-10-21       Impact factor: 5.923

5.  The mitotic checkpoint complex (MCC): looking back and forth after 15 years.

Authors:  Song-Tao Liu; Hang Zhang
Journal:  AIMS Mol Sci       Date:  2016-10-24

6.  Multi-scale stochastic organization-oriented coarse-graining exemplified on the human mitotic checkpoint.

Authors:  Richard Henze; Chunyan Mu; Mate Puljiz; Nishanthan Kamaleson; Jan Huwald; John Haslegrave; Pietro Speroni di Fenizio; David Parker; Christopher Good; Jonathan E Rowe; Bashar Ibrahim; Peter Dittrich
Journal:  Sci Rep       Date:  2019-03-07       Impact factor: 4.379

Review 7.  A quantitative systems view of the spindle assembly checkpoint.

Authors:  Andrea Ciliberto; Jagesh V Shah
Journal:  EMBO J       Date:  2009-07-23       Impact factor: 11.598

8.  Cycles and the qualitative evolution of chemical systems.

Authors:  Peter Kreyssig; Gabi Escuela; Bryan Reynaert; Tomas Veloz; Bashar Ibrahim; Peter Dittrich
Journal:  PLoS One       Date:  2012-10-11       Impact factor: 3.240

9.  Spatial rule-based modeling: a method and its application to the human mitotic kinetochore.

Authors:  Bashar Ibrahim; Richard Henze; Gerd Gruenert; Matthew Egbert; Jan Huwald; Peter Dittrich
Journal:  Cells       Date:  2013-07-02       Impact factor: 6.600

10.  Effects of small particle numbers on long-term behaviour in discrete biochemical systems.

Authors:  Peter Kreyssig; Christian Wozar; Stephan Peter; Tomás Veloz; Bashar Ibrahim; Peter Dittrich
Journal:  Bioinformatics       Date:  2014-09-01       Impact factor: 6.937

  10 in total

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