Literature DB >> 18658239

Poly(A) leader of eukaryotic mRNA bypasses the dependence of translation on initiation factors.

Nikolay E Shirokikh1, Alexander S Spirin.   

Abstract

Eukaryotic mRNAs in which a poly(A) sequence precedes the initiation codon are known to exhibit a significantly enhanced cap-independent translation, both in vivo and in cell-free translation systems. Consistent with high expression levels of poxviral mRNAs, they contain poly(A) sequences at their 5' ends, immediately before the initiation AUG codon. Here we show that poly(A) as a leader sequence in mRNA constructs promotes the recruitment of the 40S ribosomal subunits and the efficient formation of initiation complexes at cognate AUG initiation codons in the absence of two essential translation initiation factors, eIF3 and eIF4F. These factors are known to be indispensable for the cap-dependent (and ATP-dependent) mechanism of translation initiation but are shown here to be not required if an mRNA contains a 5'-proximal poly(A). Thus, the presence of a pre-AUG poly(A) sequence results in an alternative mechanism of translation initiation. It involves the binding of initiating 40S ribosomal subunits within the 5' UTR and their phaseless, ATP-independent, diffusional movement ("phaseless wandering") along the leader sequence, with subsequent recognition of the initiation (AUG) codon.

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Year:  2008        PMID: 18658239      PMCID: PMC2485544          DOI: 10.1073/pnas.0804940105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Assembly and analysis of eukaryotic translation initiation complexes.

Authors:  Andrey V Pisarev; Anett Unbehaun; Christopher U T Hellen; Tatyana V Pestova
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

2.  In vitro synthesis of vaccinia virus late mRNA containing a 5' poly(A) leader sequence.

Authors:  C F Wright; B Moss
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

3.  Transcription at bacteriophage T4 variant late promoters. An application of a newly devised promoter-mapping method involving RNA chain retraction.

Authors:  G A Kassavetis; P G Zentner; E P Geiduschek
Journal:  J Biol Chem       Date:  1986-10-25       Impact factor: 5.157

4.  A mutant which reinitiates the polypeptide chain after chain termination.

Authors:  A Sarabhai; S Brenner
Journal:  J Mol Biol       Date:  1967-07-14       Impact factor: 5.469

5.  Role of ATP in binding and migration of 40S ribosomal subunits.

Authors:  M Kozak
Journal:  Cell       Date:  1980-11       Impact factor: 41.582

6.  The roles of individual eukaryotic translation initiation factors in ribosomal scanning and initiation codon selection.

Authors:  Tatyana V Pestova; Victoria G Kolupaeva
Journal:  Genes Dev       Date:  2002-11-15       Impact factor: 11.361

7.  Conversion of 48S translation preinitiation complexes into 80S initiation complexes as revealed by toeprinting.

Authors:  Sergey E Dmitriev; Andrey V Pisarev; Maria P Rubtsova; Yan E Dunaevsky; Ivan N Shatsky
Journal:  FEBS Lett       Date:  2003-01-02       Impact factor: 4.124

8.  Vaccinia virus produces late mRNAs by discontinuous synthesis.

Authors:  C Bertholet; E Van Meir; B ten Heggeler-Bordier; R Wittek
Journal:  Cell       Date:  1987-07-17       Impact factor: 41.582

9.  Translation of non-capped mRNAs in a eukaryotic cell-free system: acceleration of initiation rate in the course of polysome formation.

Authors:  Olga M Alekhina; Konstantin S Vassilenko; Alexander S Spirin
Journal:  Nucleic Acids Res       Date:  2007-09-26       Impact factor: 16.971

10.  Discontinuous transcription or RNA processing of vaccinia virus late messengers results in a 5' poly(A) leader.

Authors:  B Schwer; P Visca; J C Vos; H G Stunnenberg
Journal:  Cell       Date:  1987-07-17       Impact factor: 41.582

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  38 in total

Review 1.  Principles of translational control: an overview.

Authors:  John W B Hershey; Nahum Sonenberg; Michael B Mathews
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-12-01       Impact factor: 10.005

2.  Pervasive initiation and 3'-end formation of poxvirus postreplicative RNAs.

Authors:  Zhilong Yang; Craig A Martens; Daniel P Bruno; Stephen F Porcella; Bernard Moss
Journal:  J Biol Chem       Date:  2012-07-24       Impact factor: 5.157

3.  RACK1 evolved species-specific multifunctionality in translational control through sequence plasticity within a loop domain.

Authors:  Madeline G Rollins; Sujata Jha; Elizabeth T Bartom; Derek Walsh
Journal:  J Cell Sci       Date:  2019-06-19       Impact factor: 5.285

4.  Reversible, Specific, Active Aggregates of Endogenous Proteins Assemble upon Heat Stress.

Authors:  Edward W J Wallace; Jamie L Kear-Scott; Evgeny V Pilipenko; Michael H Schwartz; Pawel R Laskowski; Alexandra E Rojek; Christopher D Katanski; Joshua A Riback; Michael F Dion; Alexander M Franks; Edoardo M Airoldi; Tao Pan; Bogdan A Budnik; D Allan Drummond
Journal:  Cell       Date:  2015-09-10       Impact factor: 41.582

5.  PI3K signaling regulates rapamycin-insensitive translation initiation complex formation in vaccinia virus-infected cells.

Authors:  Izabela Zaborowska; Derek Walsh
Journal:  J Virol       Date:  2009-02-11       Impact factor: 5.103

6.  A protein that replaces the entire cellular eIF4F complex.

Authors:  Mohammad A Mir; Antonito T Panganiban
Journal:  EMBO J       Date:  2008-10-30       Impact factor: 11.598

Review 7.  Translational control of gene expression in the gonadotrope.

Authors:  Taeshin Kim; Minh-Ha T Do; Mark A Lawson
Journal:  Mol Cell Endocrinol       Date:  2013-09-11       Impact factor: 4.102

Review 8.  Translational control by 5'-untranslated regions of eukaryotic mRNAs.

Authors:  Alan G Hinnebusch; Ivaylo P Ivanov; Nahum Sonenberg
Journal:  Science       Date:  2016-06-17       Impact factor: 47.728

Review 9.  Making ends meet: New functions of mRNA secondary structure.

Authors:  Dmitri N Ermolenko; David H Mathews
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-06-29       Impact factor: 9.957

10.  Quantitative analysis of ribosome-mRNA complexes at different translation stages.

Authors:  Nikolay E Shirokikh; Elena Z Alkalaeva; Konstantin S Vassilenko; Zhanna A Afonina; Olga M Alekhina; Lev L Kisselev; Alexander S Spirin
Journal:  Nucleic Acids Res       Date:  2009-11-12       Impact factor: 16.971

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