Literature DB >> 18656958

Purification and characterization of the epoxidase catalyzing the formation of fosfomycin from Pseudomonas syringae.

Jeffrey W Munos1, Sung-Ju Moon, Steven O Mansoorabadi, Weichen Chang, Lin Hong, Feng Yan, Aimin Liu, Hung-Wen Liu.   

Abstract

The final step in the biosynthesis of fosfomycin in pan class="Species">Streptomyces wedmorensis is catalyzed by ( S)-2-hydroxypropylphosphonic acid (HPP) epoxidase ( Sw-HppE). A homologous enzyme from Pseudomonas syringae whose encoding gene ( orf3) shares a relatively low degree of sequence homology with the corresponding Sw-HppE gene has recently been isolated. This purified P. syringae protein was determined to catalyze the epoxidation of ( S)-HPP to fosfomycin and the oxidation of ( R)-HPP to 2-oxopropylphosphonic acid under the same conditions as Sw-HppE. Therefore, this protein is indeed a true HPP epoxidase and is termed Ps-HppE. Like Sw-HppE, Ps-HppE was determined to be post-translationally modified by the hydroxylation of a putative active site tyrosine (Tyr95). Analysis of the Fe(II) center by EPR spectroscopy using NO as a spin probe and molecular oxygen surrogate reveals that Ps-HppE's metal center is similar, but not identical, to that of Sw-HppE. The identity of the rate-determining step for the ( S)-HPP and ( R)-HPP reactions was determined by measuring primary deuterium kinetic effects, and the outcome of these results was correlated with density functional theory calculations. Interestingly, the reaction using the nonphysiological substrate ( R)-HPP was 1.9 times faster than that with ( S)-HPP for both Ps-HppE and Sw-HppE. This is likely due to the difference in bond dissociation energy of the abstracted hydrogen atom for each respective reaction. Thus, despite the low level of amino acid sequence identity, Ps-HppE is a close mimic of Sw-HppE, representing a second example of a non-heme iron-dependent enzyme capable of catalyzing dehydrogenation of a secondary alcohol to form a new C-O bond.

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Year:  2008        PMID: 18656958      PMCID: PMC2780581          DOI: 10.1021/bi800877v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  40 in total

1.  Protein purification and function assignment of the epoxidase catalyzing the formation of fosfomycin.

Authors:  P Liu; K Murakami; T Seki; X He; S M Yeung; T Kuzuyama; H Seto; H Liu
Journal:  J Am Chem Soc       Date:  2001-05-16       Impact factor: 15.419

2.  New scale factors for harmonic vibrational frequencies using the B3LYP density functional method with the triple-zeta basis set 6-311+G(d,p).

Authors:  M P Andersson; P Uvdal
Journal:  J Phys Chem A       Date:  2005-03-31       Impact factor: 2.781

3.  Second-line treatment of limb-threatening diabetic foot infections with intravenous fosfomycin.

Authors:  D Stengel; E Görzer; M Schintler; F J Legat; W Amann; T Pieber; A Ekkernkamp; W Graninger
Journal:  J Chemother       Date:  2005-10       Impact factor: 1.714

4.  Rapid colorimetric micromethod for the quantitation of complexed iron in biological samples.

Authors:  W W Fish
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

Review 5.  The 2-His-1-carboxylate facial triad: a versatile platform for dioxygen activation by mononuclear non-heme iron(II) enzymes.

Authors:  Kevin D Koehntop; Joseph P Emerson; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2005-03-01       Impact factor: 3.358

6.  Biosynthesis of fosfomycin, re-examination and re-confirmation of a unique Fe(II)- and NAD(P)H-dependent epoxidation reaction.

Authors:  Feng Yan; Jeffrey W Munos; Pinghua Liu; Hung-wen Liu
Journal:  Biochemistry       Date:  2006-09-26       Impact factor: 3.162

7.  Oxygenase activity in the self-hydroxylation of (s)-2-hydroxypropylphosphonic acid epoxidase involved in fosfomycin biosynthesis.

Authors:  Pinghua Liu; Mark P Mehn; Feng Yan; Zongbao Zhao; Lawrence Que; Hung-wen Liu
Journal:  J Am Chem Soc       Date:  2004-08-25       Impact factor: 15.419

8.  Identification of a variant "Rome clone" of methicillin-resistant Staphylococcus aureus with decreased susceptibility to vancomycin, responsible for an outbreak in an intensive care unit.

Authors:  Marco Cassone; Floriana Campanile; Annalisa Pantosti; Mario Venditti; Stefania Stefani
Journal:  Microb Drug Resist       Date:  2004       Impact factor: 3.431

9.  VTVH-MCD and DFT studies of thiolate bonding to [FeNO]7/[FeO2]8 complexes of isopenicillin N synthase: substrate determination of oxidase versus oxygenase activity in nonheme Fe enzymes.

Authors:  Christina D Brown; Michael L Neidig; Matthew B Neibergall; John D Lipscomb; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2007-05-17       Impact factor: 15.419

10.  Biochemical and spectroscopic studies on (S)-2-hydroxypropylphosphonic acid epoxidase: a novel mononuclear non-heme iron enzyme.

Authors:  Pinghua Liu; Aimin Liu; Feng Yan; Matt D Wolfe; John D Lipscomb; Hung-wen Liu
Journal:  Biochemistry       Date:  2003-10-14       Impact factor: 3.162

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  10 in total

Review 1.  Enzymatic chemistry of cyclopropane, epoxide, and aziridine biosynthesis.

Authors:  Christopher J Thibodeaux; Wei-chen Chang; Hung-wen Liu
Journal:  Chem Rev       Date:  2011-10-21       Impact factor: 60.622

2.  Evidence that the fosfomycin-producing epoxidase, HppE, is a non-heme-iron peroxidase.

Authors:  Chen Wang; Wei-chen Chang; Yisong Guo; Hui Huang; Spencer C Peck; Maria E Pandelia; Geng-min Lin; Hung-wen Liu; Carsten Krebs; J Martin Bollinger
Journal:  Science       Date:  2013-10-10       Impact factor: 47.728

3.  Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.

Authors:  Philip Olivares; Emily C Ulrich; Jonathan R Chekan; Wilfred A van der Donk; Satish K Nair
Journal:  ACS Chem Biol       Date:  2016-12-27       Impact factor: 5.100

4.  In vitro studies on the interaction between human serum albumin and fosfomycin disodium salt, an antibiotic drug by multi-spectroscopic and molecular docking methods.

Authors:  Manjunath D Meti; Kirthi S Byadagi; Sharanappa T Nandibewoor; Shrinivas D Joshi; Uttam A More; Shivamurti A Chimatadar
Journal:  Mol Biol Rep       Date:  2014-01-18       Impact factor: 2.316

5.  Different biosynthetic pathways to fosfomycin in Pseudomonas syringae and Streptomyces species.

Authors:  Seung Young Kim; Kou-San Ju; William W Metcalf; Bradley S Evans; Tomohisa Kuzuyama; Wilfred A van der Donk
Journal:  Antimicrob Agents Chemother       Date:  2012-05-21       Impact factor: 5.191

6.  Evidence for radical-mediated catalysis by HppE: a study using cyclopropyl and methylenecyclopropyl substrate analogues.

Authors:  Hui Huang; Wei-chen Chang; Pei-Jing Pai; Anthony Romo; Steven O Mansoorabadi; David H Russell; Hung-wen Liu
Journal:  J Am Chem Soc       Date:  2012-09-24       Impact factor: 15.419

7.  Initial characterization of Fom3 from Streptomyces wedmorensis: The methyltransferase in fosfomycin biosynthesis.

Authors:  Kylie D Allen; Susan C Wang
Journal:  Arch Biochem Biophys       Date:  2013-12-24       Impact factor: 4.013

8.  Structural basis of regiospecificity of a mononuclear iron enzyme in antibiotic fosfomycin biosynthesis.

Authors:  Danny Yun; Mishtu Dey; Luke J Higgins; Feng Yan; Hung-wen Liu; Catherine L Drennan
Journal:  J Am Chem Soc       Date:  2011-06-30       Impact factor: 15.419

9.  Multi-spectroscopic investigation of the binding interaction of fosfomycin with bovine serum albumin.

Authors:  Manjunath D Meti; Sharanappa T Nandibewoor; Shrinivas D Joshi; Uttam A More; Shivamurti A Chimatadar
Journal:  J Pharm Anal       Date:  2015-02-14

Review 10.  The intriguing biology and chemistry of fosfomycin: the only marketed phosphonate antibiotic.

Authors:  Yingying Cao; Qingyao Peng; Shanni Li; Zixin Deng; Jiangtao Gao
Journal:  RSC Adv       Date:  2019-12-19       Impact factor: 4.036

  10 in total

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