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Literature DB >> 18655045

mzML: a single, unifying data format for mass spectrometer output.

Eric Deutsch¹.

Abstract

Mesh：

Year: 2008 PMID： 18655045 DOI： 10.1002/pmic.200890049

Source DB: PubMed Journal: Proteomics ISSN： 1615-9853 Impact factor: 3.984

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Cited

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64 in total

1. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles).

Authors: Christopher R Kinsinger; James Apffel; Mark Baker; Xiaopeng Bian; Christoph H Borchers; Ralph Bradshaw; Mi-Youn Brusniak; Daniel W Chan; Eric W Deutsch; Bruno Domon; Jeff Gorman; Rudolf Grimm; William Hancock; Henning Hermjakob; David Horn; Christie Hunter; Patrik Kolar; Hans-Joachim Kraus; Hanno Langen; Rune Linding; Robert L Moritz; Gilbert S Omenn; Ron Orlando; Akhilesh Pandey; Peipei Ping; Amir Rahbar; Robert Rivers; Sean L Seymour; Richard J Simpson; Douglas Slotta; Richard D Smith; Stephen E Stein; David L Tabb; Danilo Tagle; John R Yates; Henry Rodriguez
Journal: Mol Cell Proteomics Date: 2011-11-03 Impact factor: 5.911

2. msCompare: a framework for quantitative analysis of label-free LC-MS data for comparative candidate biomarker studies.

Authors: Berend Hoekman; Rainer Breitling; Frank Suits; Rainer Bischoff; Peter Horvatovich
Journal: Mol Cell Proteomics Date: 2012-02-07 Impact factor: 5.911

3. Supporting tool suite for production proteomics.

Authors: Ze-Qiang Ma; David L Tabb; Joseph Burden; Matthew C Chambers; Matthew B Cox; Michael J Cantrell; Amy-Joan L Ham; Michael D Litton; Michael R Oreto; William C Schultz; Scott M Sobecki; Tina Y Tsui; Gregory R Wernke; Daniel C Liebler
Journal: Bioinformatics Date: 2011-09-29 Impact factor: 6.937

4. An efficient data format for mass spectrometry-based proteomics.

Authors: Anuj R Shah; Jennifer Davidson; Matthew E Monroe; Anoop M Mayampurath; William F Danielson; Yan Shi; Aaron C Robinson; Brian H Clowers; Mikhail E Belov; Gordon A Anderson; Richard D Smith
Journal: J Am Soc Mass Spectrom Date: 2010-07-07 Impact factor: 3.109

10. PeptideDepot: flexible relational database for visual analysis of quantitative proteomic data and integration of existing protein information.

Authors: Kebing Yu; Arthur R Salomon
Journal: Proteomics Date: 2009-12 Impact factor: 3.984

mzML: a single, unifying data format for mass spectrometer output.

1. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles).

2. msCompare: a framework for quantitative analysis of label-free LC-MS data for comparative candidate biomarker studies.

3. Supporting tool suite for production proteomics.

4. An efficient data format for mass spectrometry-based proteomics.

Review 5. Molecular mass spectrometry imaging in biomedical and life science research.

6. HTAPP: high-throughput autonomous proteomic pipeline.

7. mzAPI: a new strategy for efficiently sharing mass spectrometry data.

8. A proteomics search algorithm specifically designed for high-resolution tandem mass spectra.

9. Trans-Proteomic Pipeline supports and improves analysis of electron transfer dissociation data sets.

10. PeptideDepot: flexible relational database for visual analysis of quantitative proteomic data and integration of existing protein information.