Literature DB >> 18653377

Plant cell types: reporting and sampling with new technologies.

Timothy Nelson1, Neeru Gandotra, S Lori Tausta.   

Abstract

Plants have relatively few cell types, but their specialized functions and their interactions are essential for physiology, development, and defense. The contributions of individual cells have been distinguished by methods including in situ reporting, cell sampling, and cell separation, thus far mostly limited to measurement of single transcripts, proteins, or metabolites. Advances in transcriptomics, proteomics, metabolomics, and activity assays with small samples and in the modeling of these data into networks of expression, regulation, interaction, and metabolism make it possible to evaluate the roles of cell types at system levels. Recent analyses include cell types of developing roots, bundle sheath and mesophyll cells of C4-type leaves, xylem and phloem cells of vascular systems, and specialized regions of embryos and shoot apices.

Mesh:

Year:  2008        PMID: 18653377     DOI: 10.1016/j.pbi.2008.06.006

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  20 in total

1.  Apomictic and sexual ovules of Boechera display heterochronic global gene expression patterns.

Authors:  Timothy F Sharbel; Marie-Luise Voigt; José M Corral; Giulio Galla; Jochen Kumlehn; Christian Klukas; Falk Schreiber; Heiko Vogel; Björn Rotter
Journal:  Plant Cell       Date:  2010-03-19       Impact factor: 11.277

2.  Amino acid metabolism at the maternal-filial boundary of young barley seeds: a microdissection-based study.

Authors:  Johannes Thiel; Martin Müller; Winfriede Weschke; Hans Weber
Journal:  Planta       Date:  2009-05-05       Impact factor: 4.116

Review 3.  Gene expression analysis, proteomics, and network discovery.

Authors:  Sacha Baginsky; Lars Hennig; Philip Zimmermann; Wilhelm Gruissem
Journal:  Plant Physiol       Date:  2009-12-11       Impact factor: 8.340

4.  Subtissue-specific evaluation of promoter efficiency by quantitative fluorometric assay in laser microdissected tissues of rapeseed.

Authors:  Jan Jasik; Silke Schiebold; Hardy Rolletschek; Peter Denolf; Katrien Van Adenhove; Thomas Altmann; Ljudmilla Borisjuk
Journal:  Plant Physiol       Date:  2011-08-08       Impact factor: 8.340

Review 5.  Long-distance transport, vacuolar sequestration, tolerance, and transcriptional responses induced by cadmium and arsenic.

Authors:  David G Mendoza-Cózatl; Timothy O Jobe; Felix Hauser; Julian I Schroeder
Journal:  Curr Opin Plant Biol       Date:  2011-08-05       Impact factor: 7.834

6.  Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides insights into metabolic and regulatory specialization and cuticle formation.

Authors:  Antonio J Matas; Trevor H Yeats; Gregory J Buda; Yi Zheng; Subhasish Chatterjee; Takayuki Tohge; Lalit Ponnala; Avital Adato; Asaph Aharoni; Ruth Stark; Alisdair R Fernie; Zhangjun Fei; James J Giovannoni; Jocelyn K C Rose
Journal:  Plant Cell       Date:  2011-11-01       Impact factor: 11.277

7.  Tissue-specific transcriptome profiling of the citrus fruit epidermis and subepidermis using laser capture microdissection.

Authors:  Antonio J Matas; Javier Agustí; Francisco R Tadeo; Manuel Talón; Jocelyn K C Rose
Journal:  J Exp Bot       Date:  2010-06-02       Impact factor: 6.992

8.  Cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control.

Authors:  Yuling Jiao; Elliot M Meyerowitz
Journal:  Mol Syst Biol       Date:  2010-10-05       Impact factor: 11.429

9.  A real-time fluorogenic assay for the visualization of glycoside hydrolase activity in planta.

Authors:  Farid M Ibatullin; Alicja Banasiak; Martin J Baumann; Lionel Greffe; Junko Takahashi; Ewa J Mellerowicz; Harry Brumer
Journal:  Plant Physiol       Date:  2009-09-25       Impact factor: 8.340

10.  A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies.

Authors:  Yuling Jiao; S Lori Tausta; Neeru Gandotra; Ning Sun; Tie Liu; Nicole K Clay; Teresa Ceserani; Meiqin Chen; Ligeng Ma; Matthew Holford; Hui-yong Zhang; Hongyu Zhao; Xing-Wang Deng; Timothy Nelson
Journal:  Nat Genet       Date:  2009-01-04       Impact factor: 38.330

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