Literature DB >> 18645230

Structures of Arthrobacter globiformis urate oxidase-ligand complexes.

Ella Czarina Magat Juan1, Md Mominul Hoque, Satoru Shimizu, Md Tofazzal Hossain, Tamotsu Yamamoto, Shigeyuki Imamura, Kaoru Suzuki, Masaru Tsunoda, Hitoshi Amano, Takeshi Sekiguchi, Akio Takénaka.   

Abstract

The enzyme urate oxidase catalyzes the conversion of uric acid to 5-hydroxyisourate, one of the steps in the ureide pathway. Arthrobacter globiformis urate oxidase (AgUOX) was crystallized and structures of crystals soaked in the substrate uric acid, the inhibitor 8-azaxanthin and allantoin have been determined at 1.9-2.2 A resolution. The biological unit is a homotetramer and two homotetramers comprise the asymmetric crystallographic unit. Each subunit contains two T-fold domains of betabetaalphaalphabetabeta topology, which are usually found in purine- and pterin-binding enzymes. The uric acid substrate is bound tightly to the enzyme by interactions with Arg180, Leu222 and Gln223 from one subunit and with Thr67 and Asp68 of the neighbouring subunit in the tetramer. In the other crystal structures, lithium borate, 8-azaxanthin and allantoate are bound to the enzyme in a similar manner as uric acid. Based on these AgUOX structures, the enzymatic reaction mechanism of UOX has been proposed.

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Year:  2008        PMID: 18645230     DOI: 10.1107/S0907444908013590

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  7 in total

1.  Structure-function perturbation and dissociation of tetrameric urate oxidase by high hydrostatic pressure.

Authors:  Eric Girard; Stéphane Marchal; Javier Perez; Stéphanie Finet; Richard Kahn; Roger Fourme; Guillaume Marassio; Anne-Claire Dhaussy; Thierry Prangé; Marion Giffard; Fabienne Dulin; Françoise Bonneté; Reinhard Lange; Jacques H Abraini; Mohamed Mezouar; Nathalie Colloc'h
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

2.  Evolutionary history and metabolic insights of ancient mammalian uricases.

Authors:  James T Kratzer; Miguel A Lanaspa; Michael N Murphy; Christina Cicerchi; Christina L Graves; Peter A Tipton; Eric A Ortlund; Richard J Johnson; Eric A Gaucher
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

3.  Protein function annotation by local binding site surface similarity.

Authors:  Russell Spitzer; Ann E Cleves; Rocco Varela; Ajay N Jain
Journal:  Proteins       Date:  2013-11-22

4.  A Therapeutic Uricase with Reduced Immunogenicity Risk and Improved Development Properties.

Authors:  Andrew C Nyborg; Chris Ward; Anna Zacco; Benoy Chacko; Luba Grinberg; James C Geoghegan; Ryan Bean; Michaela Wendeler; Frank Bartnik; Ellen O'Connor; Flaviu Gruia; Vidyashankara Iyer; Hui Feng; Varnika Roy; Mark Berge; Jeffrey N Miner; David M Wilson; Dongmei Zhou; Simone Nicholson; Clynn Wilker; Chi Y Wu; Susan Wilson; Lutz Jermutus; Herren Wu; David A Owen; Jane Osbourn; Steven Coats; Manuel Baca
Journal:  PLoS One       Date:  2016-12-21       Impact factor: 3.240

5.  Molecular Elucidation of a Urate Oxidase from Deinococcus radiodurans for Hyperuricemia and Gout Therapy.

Authors:  Yi-Chih Chiu; Ting-Syuan Hsu; Chen-Yu Huang; Chun-Hua Hsu
Journal:  Int J Mol Sci       Date:  2021-05-25       Impact factor: 5.923

6.  Catalysis and Structure of Zebrafish Urate Oxidase Provide Insights into the Origin of Hyperuricemia in Hominoids.

Authors:  Marialaura Marchetti; Anastasia Liuzzi; Beatrice Fermi; Romina Corsini; Claudia Folli; Valentina Speranzini; Francesco Gandolfi; Stefano Bettati; Luca Ronda; Laura Cendron; Rodolfo Berni; Giuseppe Zanotti; Riccardo Percudani
Journal:  Sci Rep       Date:  2016-12-06       Impact factor: 4.379

7.  Adaptive effect of sericin on hepatic mitochondrial conformation through its regulation of apoptosis, autophagy and energy maintenance: a proteomics approach.

Authors:  Sumate Ampawong; Duangnate Isarangkul; Onrapak Reamtong; Pornanong Aramwit
Journal:  Sci Rep       Date:  2018-10-08       Impact factor: 4.379

  7 in total

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