Literature DB >> 18633454

Proteomics studies of pancreatic cancer.

Ru Chen1, Sheng Pan, Ruedi Aebersold, Teresa A Brentnall.   

Abstract

Pancreatic cancer is the fourth leading cause of cancer death in the United States, with 4% survival 5 years after diagnosis. Biomarkers are desperately needed to improve earlier, more curable cancer diagnosis and to develop new effective therapeutic targets. The development of quantitative proteomics technologies in recent years offers great promise for understanding the complex molecular events of tumorigenesis at the protein level, and has stimulated great interest in applying the technology for pancreatic cancer studies. Proteomic studies of pancreatic tissues, juice, serum/plasma, and cell lines have recently attempted to identify differentially expressed proteins in pancreatic cancer to dissect the abnormal signaling pathways underlying oncogenesis, and to detect new biomarkers. It can be expected that the continuing evolution of proteomics technology with better resolution and sensitivity will greatly enhance our capability in combating pancreatic cancer.

Entities:  

Year:  2007        PMID: 18633454      PMCID: PMC2467510          DOI: 10.1002/prca.200700414

Source DB:  PubMed          Journal:  Proteomics Clin Appl        ISSN: 1862-8346            Impact factor:   3.494


  73 in total

1.  Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search.

Authors:  Andrew Keller; Alexey I Nesvizhskii; Eugene Kolker; Ruedi Aebersold
Journal:  Anal Chem       Date:  2002-10-15       Impact factor: 6.986

2.  Accurate qualitative and quantitative proteomic analysis of clinical hepatocellular carcinoma using laser capture microdissection coupled with isotope-coded affinity tag and two-dimensional liquid chromatography mass spectrometry.

Authors:  Chen Li; Yi Hong; Ye-Xiong Tan; Hu Zhou; Jian-Hua Ai; Su-Jun Li; Lei Zhang; Qi-Chang Xia; Jia-Rui Wu; Hong-Yang Wang; Rong Zeng
Journal:  Mol Cell Proteomics       Date:  2004-01-15       Impact factor: 5.911

3.  Analysis of serum proteomic patterns for early cancer diagnosis: drawing attention to potential problems.

Authors:  Eleftherios P Diamandis
Journal:  J Natl Cancer Inst       Date:  2004-03-03       Impact factor: 13.506

Review 4.  Mass spectrometry as a diagnostic and a cancer biomarker discovery tool: opportunities and potential limitations.

Authors:  Eleftherios P Diamandis
Journal:  Mol Cell Proteomics       Date:  2004-02-28       Impact factor: 5.911

Review 5.  Proteomics in pancreatic disease.

Authors:  Matthias Löhr; Ralf Faissner
Journal:  Pancreatology       Date:  2004-03-10       Impact factor: 3.996

6.  Search for cancer markers from endometrial tissues using differentially labeled tags iTRAQ and cICAT with multidimensional liquid chromatography and tandem mass spectrometry.

Authors:  Leroi DeSouza; Georg Diehl; Mary Joe Rodrigues; Jingzhong Guo; Alexander D Romaschin; Terence J Colgan; K W Michael Siu
Journal:  J Proteome Res       Date:  2005 Mar-Apr       Impact factor: 4.466

7.  Electrospray interface for liquid chromatographs and mass spectrometers.

Authors:  C M Whitehouse; R N Dreyer; M Yamashita; J B Fenn
Journal:  Anal Chem       Date:  1985-03       Impact factor: 6.986

8.  Quantitative proteomic profiling of pancreatic cancer juice.

Authors:  Ru Chen; Sheng Pan; Eugene C Yi; Samuel Donohoe; Mary P Bronner; John D Potter; David R Goodlett; Ruedi Aebersold; Teresa A Brentnall
Journal:  Proteomics       Date:  2006-07       Impact factor: 3.984

9.  Comparison of pancreas juice proteins from cancer versus pancreatitis using quantitative proteomic analysis.

Authors:  Ru Chen; Sheng Pan; Kelly Cooke; Kara White Moyes; Mary P Bronner; David R Goodlett; Ruedi Aebersold; Teresa A Brentnall
Journal:  Pancreas       Date:  2007-01       Impact factor: 3.327

10.  Global internal standard technology for comparative proteomics.

Authors:  Asish Chakraborty; Fred E Regnier
Journal:  J Chromatogr A       Date:  2002-03-08       Impact factor: 4.759

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  14 in total

1.  Quantitative proteomic analyses of influenza virus-infected cultured human lung cells.

Authors:  Kevin M Coombs; Alicia Berard; Wanhong Xu; Oleg Krokhin; Xiaobo Meng; John P Cortens; Darwyn Kobasa; John Wilkins; Earl G Brown
Journal:  J Virol       Date:  2010-08-11       Impact factor: 5.103

2.  Attenuation of mouse melanoma by A/C magnetic field after delivery of bi-magnetic nanoparticles by neural progenitor cells.

Authors:  Raja Shekar Rachakatla; Sivasai Balivada; Gwi-Moon Seo; Carl B Myers; Hongwang Wang; Thilani N Samarakoon; Raj Dani; Marla Pyle; Franklin O Kroh; Brandon Walker; Xiaoxuan Leaym; Olga B Koper; Viktor Chikan; Stefan H Bossmann; Masaaki Tamura; Deryl L Troyer
Journal:  ACS Nano       Date:  2010-11-08       Impact factor: 15.881

Review 3.  Proteomics analysis of bodily fluids in pancreatic cancer.

Authors:  Sheng Pan; Teresa A Brentnall; Ru Chen
Journal:  Proteomics       Date:  2015-04-27       Impact factor: 3.984

4.  Protein alterations associated with pancreatic cancer and chronic pancreatitis found in human plasma using global quantitative proteomics profiling.

Authors:  Sheng Pan; Ru Chen; David A Crispin; Damon May; Tyler Stevens; Martin W McIntosh; Mary P Bronner; Argyrios Ziogas; Hoda Anton-Culver; Teresa A Brentnall
Journal:  J Proteome Res       Date:  2011-03-28       Impact factor: 4.466

5.  Proteomic analysis reveals Warburg effect and anomalous metabolism of glutamine in pancreatic cancer cells.

Authors:  Weidong Zhou; Michela Capello; Claudia Fredolini; Leda Racanicchi; Lorenzo Piemonti; Lance A Liotta; Francesco Novelli; Emanuel F Petricoin
Journal:  J Proteome Res       Date:  2011-11-17       Impact factor: 4.466

6.  Identification and verification of transthyretin as a potential biomarker for pancreatic ductal adenocarcinoma.

Authors:  Jiong Chen; Long-Jiang Chen; Yun-Lian Xia; Hang-Cheng Zhou; Ren-Bao Yang; Wen Wu; Yin Lu; Li-Wei Hu; Yue Zhao
Journal:  J Cancer Res Clin Oncol       Date:  2013-04-02       Impact factor: 4.553

7.  Elevated level of anterior gradient-2 in pancreatic juice from patients with pre-malignant pancreatic neoplasia.

Authors:  Ru Chen; Sheng Pan; Xiaobo Duan; Brad H Nelson; Rob A Sahota; Sarah de Rham; Richard A Kozarek; Martin McIntosh; Teresa A Brentnall
Journal:  Mol Cancer       Date:  2010-06-15       Impact factor: 27.401

8.  Quantitative proteomics investigation of pancreatic intraepithelial neoplasia.

Authors:  Sheng Pan; Ru Chen; Beth Ann Reimel; David A Crispin; Hamid Mirzaei; Kelly Cooke; Joshua F Coleman; Zhaoli Lane; Mary P Bronner; David R Goodlett; Martin W McIntosh; William Traverso; Ruedi Aebersold; Teresa A Brentnall
Journal:  Electrophoresis       Date:  2009-04       Impact factor: 3.535

Review 9.  Mass spectrometry based targeted protein quantification: methods and applications.

Authors:  Sheng Pan; Ruedi Aebersold; Ru Chen; John Rush; David R Goodlett; Martin W McIntosh; Jing Zhang; Teresa A Brentnall
Journal:  J Proteome Res       Date:  2009-02       Impact factor: 4.466

Review 10.  Tissue proteomics in pancreatic cancer study: discovery, emerging technologies, and challenges.

Authors:  Sheng Pan; Teresa A Brentnall; Kimberly Kelly; Ru Chen
Journal:  Proteomics       Date:  2013-01-07       Impact factor: 3.984

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