Literature DB >> 18632565

The capillarity picture and the kinetics of one-dimensional protein folding.

Diego U Ferreiro1, Peter G Wolynes.   

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Year:  2008        PMID: 18632565      PMCID: PMC2481373          DOI: 10.1073/pnas.0805287105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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  20 in total

1.  An experimentally determined protein folding energy landscape.

Authors:  Cecilia C Mello; Doug Barrick
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-17       Impact factor: 11.205

Review 2.  The protein folding 'speed limit'.

Authors:  Jan Kubelka; James Hofrichter; William A Eaton
Journal:  Curr Opin Struct Biol       Date:  2004-02       Impact factor: 6.809

3.  The energy landscape of modular repeat proteins: topology determines folding mechanism in the ankyrin family.

Authors:  Diego U Ferreiro; Samuel S Cho; Elizabeth A Komives; Peter G Wolynes
Journal:  J Mol Biol       Date:  2005-10-13       Impact factor: 5.469

4.  Stepwise unfolding of ankyrin repeats in a single protein revealed by atomic force microscopy.

Authors:  Lewyn Li; Svava Wetzel; Andreas Plückthun; Julio M Fernandez
Journal:  Biophys J       Date:  2005-12-30       Impact factor: 4.033

5.  A new folding paradigm for repeat proteins.

Authors:  Tommi Kajander; Aitziber L Cortajarena; Ewan R G Main; Simon G J Mochrie; Lynne Regan
Journal:  J Am Chem Soc       Date:  2005-07-27       Impact factor: 15.419

6.  Shifting transition states in the unfolding of a large ankyrin repeat protein.

Authors:  Nicolas D Werbeck; Pamela J E Rowling; Vasuki R Chellamuthu; Laura S Itzhaki
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-16       Impact factor: 11.205

7.  Folding funnels and energy landscapes of larger proteins within the capillarity approximation.

Authors:  P G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

8.  Spin glasses and the statistical mechanics of protein folding.

Authors:  J D Bryngelson; P G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  1987-11       Impact factor: 11.205

9.  Limits of cooperativity in a structurally modular protein: response of the Notch ankyrin domain to analogous alanine substitutions in each repeat.

Authors:  Christina Marchetti Bradley; Doug Barrick
Journal:  J Mol Biol       Date:  2002-11-22       Impact factor: 5.469

10.  Expansion of protein domain repeats.

Authors:  Asa K Björklund; Diana Ekman; Arne Elofsson
Journal:  PLoS Comput Biol       Date:  2006-07-14       Impact factor: 4.475

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  15 in total

1.  Full reconstruction of a vectorial protein folding pathway by atomic force microscopy and molecular dynamics simulations.

Authors:  Whasil Lee; Xiancheng Zeng; Huan-Xiang Zhou; Vann Bennett; Weitao Yang; Piotr E Marszalek
Journal:  J Biol Chem       Date:  2010-09-24       Impact factor: 5.157

2.  Folding pathway of a multidomain protein depends on its topology of domain connectivity.

Authors:  Takashi Inanami; Tomoki P Terada; Masaki Sasai
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-29       Impact factor: 11.205

3.  Detailing Protein Landscapes under Pressure.

Authors:  Rocío Espada; Ignacio E Sánchez; Diego U Ferreiro
Journal:  Biophys J       Date:  2016-12-06       Impact factor: 4.033

4.  Modulation of folding kinetics of repeat proteins: interplay between intra- and interdomain interactions.

Authors:  Tzachi Hagai; Ariel Azia; Emmanuel Trizac; Yaakov Levy
Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033

5.  Direct observation of parallel folding pathways revealed using a symmetric repeat protein system.

Authors:  Tural Aksel; Doug Barrick
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

Review 6.  Frustration in biomolecules.

Authors:  Diego U Ferreiro; Elizabeth A Komives; Peter G Wolynes
Journal:  Q Rev Biophys       Date:  2014-09-16       Impact factor: 5.318

7.  Folding kinetics of the cooperatively folded subdomain of the IκBα ankyrin repeat domain.

Authors:  Ingrid DeVries; Diego U Ferreiro; Ignacio E Sánchez; Elizabeth A Komives
Journal:  J Mol Biol       Date:  2011-02-15       Impact factor: 5.469

8.  Evolution and folding of repeat proteins.

Authors:  Ezequiel A Galpern; Jacopo Marchi; Thierry Mora; Aleksandra M Walczak; Diego U Ferreiro
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-29       Impact factor: 12.779

9.  Characterization of the unfolded state of repeat proteins.

Authors:  Amit Mor; Gilad Haran; Yaakov Levy
Journal:  HFSP J       Date:  2008-11-12

10.  Protein frustratometer: a tool to localize energetic frustration in protein molecules.

Authors:  Michael Jenik; R Gonzalo Parra; Leandro G Radusky; Adrian Turjanski; Peter G Wolynes; Diego U Ferreiro
Journal:  Nucleic Acids Res       Date:  2012-05-29       Impact factor: 16.971

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