Literature DB >> 18629935

Regulation of ribosome synthesis in Escherichia coli: effects of temperature and dilution rate changes.

H S Yun1, J Hong, H C Lim.   

Abstract

The effect of temperature on the synthesis of ribosome in Escherichia coli K-12 was investigated. In continuous fermentation, the total and functioning ribosome contents decreased with increasing temperature, while the non-functioning ribosome content remained unchanged. Cells contained higher amounts of functioning ribosome at lower temperatures to compensate for the decrease in translational activity. A transient study was performed to investigate the dynamic response of the cell to changes in the dilution rate. In response to the dilution rate shift-up, the cell mass decreased until the cells produced a sufficient amount of ribosomes to support the new higher growth rate. However, the response to the dilution rate shift-down resulted in an immediate increase in cell mass. This may be due to the fact that the cell already contains enough ribosomes to support a lower growth rate corresponding to the new low dilution rate. Based on the experimental results, a mathematical model was developed to describe the cell growth at transient as well as steady states. The total ribosome content was included as a variable because it affects the growth rate of the cell.

Entities:  

Year:  1996        PMID: 18629935     DOI: 10.1002/(SICI)1097-0290(19961205)52:5<615::AID-BIT9>3.0.CO;2-M

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  10 in total

1.  Stochasticity of metabolism and growth at the single-cell level.

Authors:  Daniel J Kiviet; Philippe Nghe; Noreen Walker; Sarah Boulineau; Vanda Sunderlikova; Sander J Tans
Journal:  Nature       Date:  2014-09-03       Impact factor: 49.962

2.  Temperature affects stoichiometry and biochemical composition of Escherichia coli.

Authors:  James B Cotner; Wataru Makino; Bopaiah A Biddanda
Journal:  Microb Ecol       Date:  2006-06-10       Impact factor: 4.552

3.  Robust network topologies for temperature-inducible bioswitches.

Authors:  Di Wu; Hongli Wang; Qi Ouyang
Journal:  J Biol Eng       Date:  2022-05-23       Impact factor: 6.248

4.  A novel fed-batch based cultivation method provides high cell-density and improves yield of soluble recombinant proteins in shaken cultures.

Authors:  Mirja Krause; Kaisa Ukkonen; Tatu Haataja; Maria Ruottinen; Tuomo Glumoff; Antje Neubauer; Peter Neubauer; Antti Vasala
Journal:  Microb Cell Fact       Date:  2010-02-19       Impact factor: 5.328

5.  Mathematical modeling of translation initiation for the estimation of its efficiency to computationally design mRNA sequences with desired expression levels in prokaryotes.

Authors:  Dokyun Na; Sunjae Lee; Doheon Lee
Journal:  BMC Syst Biol       Date:  2010-05-26

6.  Rate-limiting steps in transcription dictate sensitivity to variability in cellular components.

Authors:  Jarno Mäkelä; Vinodh Kandavalli; Andre S Ribeiro
Journal:  Sci Rep       Date:  2017-09-06       Impact factor: 4.379

7.  Robust network topologies for generating oscillations with temperature-independent periods.

Authors:  Lili Wu; Qi Ouyang; Hongli Wang
Journal:  PLoS One       Date:  2017-02-02       Impact factor: 3.240

8.  Optimization of EnBase Fed-Batch Cultivation to Improve Soluble Fraction Ratio of α-Luffin Ribosome Inactivating Protein.

Authors:  Farzaneh Barkhordari; Mozhgan Raigani; Yeganeh Talebkhan Garoosi; Fereidoun Mahboudi; Fatemeh Davami
Journal:  Iran J Biotechnol       Date:  2018-04-18       Impact factor: 1.671

9.  Production of an Antibody Fragment (scFv) Targeting PcrV Protein of Pseudomonas aeruginosa in Fed-Batch Cultivation Mode

Authors:  Saba Karam; Mozhgan Raigani; Sahar Hassani Afshar; Yeganeh Talebkhan; Elham Bayat; Samira Komijani; Leila Nematollahi; Farzaneh Barkhordari; Mehdi Shafiee Ardestani; Fatemeh Davami
Journal:  Iran Biomed J       Date:  2021-11-01

Review 10.  Tackling Drug Resistant Infection Outbreaks of Global Pandemic Escherichia coli ST131 Using Evolutionary and Epidemiological Genomics.

Authors:  Tim Downing
Journal:  Microorganisms       Date:  2015-05-20
  10 in total

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