Literature DB >> 18629128

Caenorhabditis elegans-applications to nematode genomics.

William F Gregory1, John Parkinson.   

Abstract

The complete genome sequence of the free-living nematode Caenorhabditis elegans was published 4 years ago. Since then, we have seen great strides in technologies that seek to exploit this data. Here we describe the application of some of these techniques and other advances that are helping us to understand about not only the biology of this important model organism but also the entire phylum Nematoda.

Entities:  

Year:  2003        PMID: 18629128      PMCID: PMC2447415          DOI: 10.1002/cfg.260

Source DB:  PubMed          Journal:  Comp Funct Genomics        ISSN: 1531-6912


  50 in total

1.  Transgene expression in Strongyloides stercoralis following gonadal microinjection of DNA constructs.

Authors:  James B Lok; Holman C Massey
Journal:  Mol Biochem Parasitol       Date:  2002-02       Impact factor: 1.759

2.  Transformation of nematodes via ballistic DNA transfer.

Authors:  P Jackstadt; T P Wilm; H Zahner; G Hobom
Journal:  Mol Biochem Parasitol       Date:  1999-10-15       Impact factor: 1.759

Review 3.  Molecular analysis of nematode diversity and the evolution of parasitism.

Authors:  M Dorris; P De Ley; M L Blaxter
Journal:  Parasitol Today       Date:  1999-05

4.  SimiTri--visualizing similarity relationships for groups of sequences.

Authors:  John Parkinson; Mark Blaxter
Journal:  Bioinformatics       Date:  2003-02-12       Impact factor: 6.937

5.  Gene clustering based on RNAi phenotypes of ovary-enriched genes in C. elegans.

Authors:  Fabio Piano; Aaron J Schetter; Diane G Morton; Kristin C Gunsalus; Valerie Reinke; Stuart K Kim; Kenneth J Kemphues
Journal:  Curr Biol       Date:  2002-11-19       Impact factor: 10.834

6.  RNAi in C. elegans: soaking in the genome sequence.

Authors:  H Tabara; A Grishok; C C Mello
Journal:  Science       Date:  1998-10-16       Impact factor: 47.728

7.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

8.  Evidence suggesting that a fifth of annotated Caenorhabditis elegans genes may be pseudogenes.

Authors:  Andrew Mounsey; Petra Bauer; Ian A Hope
Journal:  Genome Res       Date:  2002-05       Impact factor: 9.043

Review 9.  Caenorhabditis elegans is a nematode.

Authors:  M Blaxter
Journal:  Science       Date:  1998-12-11       Impact factor: 47.728

10.  Genome-wide RNAi analysis of Caenorhabditis elegans fat regulatory genes.

Authors:  Kaveh Ashrafi; Francesca Y Chang; Jennifer L Watts; Andrew G Fraser; Ravi S Kamath; Julie Ahringer; Gary Ruvkun
Journal:  Nature       Date:  2003-01-16       Impact factor: 49.962

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