Literature DB >> 18629092

Developing a protein-interactions ontology.

Esther Ratsch1, Jörg Schultz, Jasmin Saric, Philipp Cimiano Lavin, Ulrike Wittig, Uwe Reyle, Isabel Rojas.   

Abstract

Year:  2003        PMID： 18629092      PMCID： PMC2447378          DOI： 10.1002/cfg.244

Source DB:  PubMed          Journal:  Comp Funct Genomics        ISSN： 1531-6912


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  8 in total

1.  A knowledge model for analysis and simulation of regulatory networks.

Authors:  A Rzhetsky; T Koike; S Kalachikov; S M Gomez; M Krauthammer; S H Kaplan; P Kra; J J Russo; C Friedman
Journal:  Bioinformatics       Date:  2000-12       Impact factor: 6.937

2.  An ontology for biological function based on molecular interactions.

Authors:  P D Karp
Journal:  Bioinformatics       Date:  2000-03       Impact factor: 6.937

3.  A database for cell signaling networks.

Authors:  T Takai-Igarashi; Y Nadaoka; T Kaminuma
Journal:  J Comput Biol       Date:  1998       Impact factor: 1.479

Review 4.  Protein interaction databases.

Authors:  I Xenarios; D Eisenberg
Journal:  Curr Opin Biotechnol       Date:  2001-08       Impact factor: 9.740

5.  BRENDA, enzyme data and metabolic information.

Authors:  Ida Schomburg; Antje Chang; Dietmar Schomburg
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

Review 6.  A road map for those who don't know JAK-STAT.

Authors:  David S Aaronson; Curt M Horvath
Journal:  Science       Date:  2002-05-31       Impact factor: 47.728

7.  A database system for the analysis of biochemical pathways.

Authors:  Isabel Rojas; Luca Bernardi; Esther Ratsch; Renate Kania; Ulrike Wittig; Jasmin Saric
Journal:  In Silico Biol       Date:  2002

8.  Describing biological protein interactions in terms of protein states and state transitions: the LiveDIP database.

Authors:  Xiaoqun Joyce Duan; Ioannis Xenarios; David Eisenberg
Journal:  Mol Cell Proteomics       Date:  2002-02       Impact factor: 5.911
  8 in total
  2 in total

1.  Simultaneous genome-wide inference of physical, genetic, regulatory, and functional pathway components.

Authors:  Christopher Y Park; David C Hess; Curtis Huttenhower; Olga G Troyanskaya
Journal:  PLoS Comput Biol       Date:  2010-11-24       Impact factor: 4.475

2.  OMIT: dynamic, semi-automated ontology development for the microRNA domain.

Authors:  Jingshan Huang; Jiangbo Dang; Glen M Borchert; Karen Eilbeck; He Zhang; Min Xiong; Weijian Jiang; Hao Wu; Judith A Blake; Darren A Natale; Ming Tan
Journal:  PLoS One       Date:  2014-07-15       Impact factor: 3.240
  2 in total

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