Literature DB >> 18628909

Definition of the gene content of the human genome: the need for deep experimental verification.

A J Simpson1, S J de Souza, A A Camargo, R R Brentani.   

Abstract

Based on the analysis of the drafts of the human genome sequence, it is being speculated that our species may possess an unexpectedly low number of genes. The quality of the drafts, the impossibility of accurate gene prediction and the lack of sufficient transcript sequence data, however, render such speculations very premature. The complexity of human gene structure requires additional and extensive experimental verification of transcripts that may result in major revisions of these early estimates of the number of human genes.

Entities:  

Year:  2001        PMID: 18628909      PMCID: PMC2447206          DOI: 10.1002/cfg.81

Source DB:  PubMed          Journal:  Comp Funct Genomics        ISSN: 1531-6912


  27 in total

1.  NCBI's LocusLink and RefSeq.

Authors:  D R Maglott; K S Katz; H Sicotte; K D Pruitt
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  The DNA sequence of human chromosome 22.

Authors:  I Dunham; N Shimizu; B A Roe; S Chissoe; A R Hunt; J E Collins; R Bruskiewich; D M Beare; M Clamp; L J Smink; R Ainscough; J P Almeida; A Babbage; C Bagguley; J Bailey; K Barlow; K N Bates; O Beasley; C P Bird; S Blakey; A M Bridgeman; D Buck; J Burgess; W D Burrill; K P O'Brien
Journal:  Nature       Date:  1999-12-02       Impact factor: 49.962

Review 3.  Findings emerging from complete microbial genome sequences.

Authors:  R A Clayton; O White; C M Fraser
Journal:  Curr Opin Microbiol       Date:  1998-10       Impact factor: 7.934

4.  Shotgun sequencing of the human transcriptome with ORF expressed sequence tags.

Authors:  E Dias Neto; R G Correa; S Verjovski-Almeida; M R Briones; M A Nagai; W da Silva; M A Zago; S Bordin; F F Costa; G H Goldman; A F Carvalho; A Matsukuma; G S Baia; D H Simpson; A Brunstein; P S de Oliveira; P Bucher; C V Jongeneel; M J O'Hare; F Soares; R R Brentani; L F Reis; S J de Souza; A J Simpson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

5.  Analysis of expressed sequence tags indicates 35,000 human genes.

Authors:  B Ewing; P Green
Journal:  Nat Genet       Date:  2000-06       Impact factor: 38.330

6.  The DNA sequence of human chromosome 21.

Authors:  M Hattori; A Fujiyama; T D Taylor; H Watanabe; T Yada; H S Park; A Toyoda; K Ishii; Y Totoki; D K Choi; Y Groner; E Soeda; M Ohki; T Takagi; Y Sakaki; S Taudien; K Blechschmidt; A Polley; U Menzel; J Delabar; K Kumpf; R Lehmann; D Patterson; K Reichwald; A Rump; M Schillhabel; A Schudy; W Zimmermann; A Rosenthal; J Kudoh; K Schibuya; K Kawasaki; S Asakawa; A Shintani; T Sasaki; K Nagamine; S Mitsuyama; S E Antonarakis; S Minoshima; N Shimizu; G Nordsiek; K Hornischer; P Brant; M Scharfe; O Schon; A Desario; J Reichelt; G Kauer; H Blocker; J Ramser; A Beck; S Klages; S Hennig; L Riesselmann; E Dagand; T Haaf; S Wehrmeyer; K Borzym; K Gardiner; D Nizetic; F Francis; H Lehrach; R Reinhardt; M L Yaspo
Journal:  Nature       Date:  2000-05-18       Impact factor: 49.962

7.  Estimate of human gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence.

Authors:  H Roest Crollius; O Jaillon; A Bernot; C Dasilva; L Bouneau; C Fischer; C Fizames; P Wincker; P Brottier; F Quétier; W Saurin; J Weissenbach
Journal:  Nat Genet       Date:  2000-06       Impact factor: 38.330

8.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

9.  Expression of human F8B, a gene nested within the coagulation factor VIII gene, produces multiple eye defects and developmental alterations in chimeric and transgenic mice.

Authors:  S Valleix; J C Jeanny; S Elsevier; R L Joshi; P Fayet; D Bucchini; M Delpech
Journal:  Hum Mol Genet       Date:  1999-07       Impact factor: 6.150

10.  EVI2B, a gene lying in an intron of the neurofibromatosis type 1 (NF1) gene, is as the NF1 gene involved in differentiation of melanocytes and keratinocytes and is overexpressed in cells derived from NF1 neurofibromas.

Authors:  D Kaufmann; S Gruener; F Braun; M Stark; J Griesser; S Hoffmeyer; B Bartelt
Journal:  DNA Cell Biol       Date:  1999-05       Impact factor: 3.311

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  1 in total

1.  The antisense transcriptomes of human cells.

Authors:  Yiping He; Bert Vogelstein; Victor E Velculescu; Nickolas Papadopoulos; Kenneth W Kinzler
Journal:  Science       Date:  2008-12-04       Impact factor: 47.728

  1 in total

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