Literature DB >> 10830953

The DNA sequence of human chromosome 21.

M Hattori1, A Fujiyama, T D Taylor, H Watanabe, T Yada, H S Park, A Toyoda, K Ishii, Y Totoki, D K Choi, Y Groner, E Soeda, M Ohki, T Takagi, Y Sakaki, S Taudien, K Blechschmidt, A Polley, U Menzel, J Delabar, K Kumpf, R Lehmann, D Patterson, K Reichwald, A Rump, M Schillhabel, A Schudy, W Zimmermann, A Rosenthal, J Kudoh, K Schibuya, K Kawasaki, S Asakawa, A Shintani, T Sasaki, K Nagamine, S Mitsuyama, S E Antonarakis, S Minoshima, N Shimizu, G Nordsiek, K Hornischer, P Brant, M Scharfe, O Schon, A Desario, J Reichelt, G Kauer, H Blocker, J Ramser, A Beck, S Klages, S Hennig, L Riesselmann, E Dagand, T Haaf, S Wehrmeyer, K Borzym, K Gardiner, D Nizetic, F Francis, H Lehrach, R Reinhardt, M L Yaspo.   

Abstract

Chromosome 21 is the smallest human autosome. An extra copy of chromosome 21 causes Down syndrome, the most frequent genetic cause of significant mental retardation, which affects up to 1 in 700 live births. Several anonymous loci for monogenic disorders and predispositions for common complex disorders have also been mapped to this chromosome, and loss of heterozygosity has been observed in regions associated with solid tumours. Here we report the sequence and gene catalogue of the long arm of chromosome 21. We have sequenced 33,546,361 base pairs (bp) of DNA with very high accuracy, the largest contig being 25,491,867 bp. Only three small clone gaps and seven sequencing gaps remain, comprising about 100 kilobases. Thus, we achieved 99.7% coverage of 21q. We also sequenced 281,116 bp from the short arm. The structural features identified include duplications that are probably involved in chromosomal abnormalities and repeat structures in the telomeric and pericentromeric regions. Analysis of the chromosome revealed 127 known genes, 98 predicted genes and 59 pseudogenes.

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Year:  2000        PMID: 10830953     DOI: 10.1038/35012518

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  234 in total

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Journal:  Genetics       Date:  2001-04       Impact factor: 4.562

4.  Genome-scale compositional comparisons in eukaryotes.

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6.  Gene density in the Giemsa bands of human chromosomes.

Authors:  C Federico; L Andreozzi; S Saccone; G Bernardi
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

7.  Is "junk" DNA mostly intron DNA?

Authors:  G K Wong; D A Passey; Y Huang; Z Yang; J Yu
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8.  BodyMap: a collection of 3' ESTs for analysis of human gene expression information.

Authors:  S Kawamoto; J Yoshii; K Mizuno; K Ito; Y Miyamoto; T Ohnishi; R Matoba; N Hori; Y Matsumoto; T Okumura; Y Nakao; H Yoshii; J Arimoto; H Ohashi; H Nakanishi; I Ohno; J Hashimoto; K Shimizu; K Maeda; H Kuriyama; K Nishida; A Shimizu-Matsumoto; W Adachi; R Ito; S Kawasaki; K S Chae
Journal:  Genome Res       Date:  2000-11       Impact factor: 9.043

9.  Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells.

Authors:  Q H Zhang; M Ye; X Y Wu; S X Ren; M Zhao; C J Zhao; G Fu; Y Shen; H Y Fan; G Lu; M Zhong; X R Xu; Z G Han; J W Zhang; J Tao; Q H Huang; J Zhou; G X Hu; J Gu; S J Chen; Z Chen
Journal:  Genome Res       Date:  2000-10       Impact factor: 9.043

10.  Mosaic structure of the DNA molecules of the human chromosomes 21 and 22.

Authors:  D Häring; J Kypr
Journal:  Mol Biol Rep       Date:  2001-03       Impact factor: 2.316

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