Literature DB >> 18607106

Purification, crystallization and preliminary crystallographic studies of plant S-adenosyl-L-homocysteine hydrolase (Lupinus luteus).

Krzysztof Brzezinski1, Grzegorz Bujacz, Mariusz Jaskolski.   

Abstract

By degrading S-adenosyl-L-homocysteine, which is a byproduct of S-adenosyl-L-methionine-dependent methylation reactions, S-adenosyl-L-homocysteine hydrolase (SAHase) acts as a regulator of cellular methylation processes. S-Adenosyl-L-homocysteine hydrolase from the leguminose plant yellow lupin (Lupinus luteus), LlSAHase, which is composed of 485 amino acids and has a molecular weight of 55 kDa, has been cloned, expressed in Escherichia coli and purified. Crystals of LlSAHase in complex with adenosine were obtained by the hanging-drop vapour-diffusion method using 20%(w/v) PEG 4000 and 10%(v/v) 2-propanol as precipitants in 0.1 M Tris-HCl buffer pH 8.0. The crystals were tetragonal, space group P4(3)2(1)2, with unit-cell parameters a = 122.4, c = 126.5 A and contained two protein molecules in the asymmetric unit, corresponding to the functional dimeric form of the enzyme. Atomic resolution (1.17 A) X-ray diffraction data have been collected using synchrotron radiation.

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Year:  2008        PMID: 18607106      PMCID: PMC2443962          DOI: 10.1107/S1744309108017703

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  13 in total

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

2.  Structure determination of selenomethionyl S-adenosylhomocysteine hydrolase using data at a single wavelength.

Authors:  M A Turner; C S Yuan; R T Borchardt; M S Hershfield; G D Smith; P L Howell
Journal:  Nat Struct Biol       Date:  1998-05

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  Sequence determination and analysis of S-adenosyl-L-homocysteine hydrolase from yellow lupine (Lupinus luteus).

Authors:  K Brzeziński; R Janowski; J Podkowiński; M Jaskólski
Journal:  Acta Biochim Pol       Date:  2001       Impact factor: 2.149

5.  Crystal structure of S-adenosylhomocysteine hydrolase from rat liver.

Authors:  Y Hu; J Komoto; Y Huang; T Gomi; H Ogawa; Y Takata; M Fujioka; F Takusagawa
Journal:  Biochemistry       Date:  1999-06-29       Impact factor: 3.162

6.  Catalytic strategy of S-adenosyl-L-homocysteine hydrolase: transition-state stabilization and the avoidance of abortive reactions.

Authors:  Xiaoda Yang; Yongbo Hu; Daniel H Yin; Mary A Turner; Mengmeng Wang; Ronald T Borchardt; P Lynne Howell; Krzysztof Kuczera; Richard L Schowen
Journal:  Biochemistry       Date:  2003-02-25       Impact factor: 3.162

7.  Bayesian phylogenetic analysis reveals two-domain topology of S-adenosylhomocysteine hydrolase protein sequences.

Authors:  Tomasz Stepkowski; Krzysztof Brzeziński; Andrzej B Legocki; Mariusz Jaskólski; Gilles Béna
Journal:  Mol Phylogenet Evol       Date:  2005-01       Impact factor: 4.286

8.  Adenosylhomocysteine hydrolase. Crystallization of the purified enzyme and its properties.

Authors:  H H Richards; P K Chiang; G L Cantoni
Journal:  J Biol Chem       Date:  1978-06-25       Impact factor: 5.157

9.  Crystal structure of S-adenosyl-L-homocysteine hydrolase from the human malaria parasite Plasmodium falciparum.

Authors:  Nobutada Tanaka; Masayuki Nakanishi; Yoshio Kusakabe; Katsura Shiraiwa; Saori Yabe; Yasutomo Ito; Yukio Kitade; Kazuo T Nakamura
Journal:  J Mol Biol       Date:  2004-10-29       Impact factor: 5.469

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  11 in total

1.  Inhibition of SAH-hydrolase activity during seed germination leads to deregulation of flowering genes and altered flower morphology in tobacco.

Authors:  Jaroslav Fulneček; Roman Matyášek; Ivan Votruba; Antonín Holý; Kateřina Křížová; Aleš Kovařík
Journal:  Mol Genet Genomics       Date:  2011-01-28       Impact factor: 3.291

2.  S-adenosyl-L-homocysteine hydrolase from a hyperthermophile (Thermotoga maritima) is expressed in Escherichia coli in inactive form - Biochemical and structural studies.

Authors:  Krzysztof Brzezinski; Justyna Czyrko; Joanna Sliwiak; Edyta Nalewajko-Sieliwoniuk; Mariusz Jaskolski; Boguslaw Nocek; Zbigniew Dauter
Journal:  Int J Biol Macromol       Date:  2017-06-16       Impact factor: 6.953

3.  High-resolution structures of complexes of plant S-adenosyl-L-homocysteine hydrolase (Lupinus luteus).

Authors:  Krzysztof Brzezinski; Zbigniew Dauter; Mariusz Jaskolski
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-02-07

4.  Crystallization of mouse S-adenosyl-L-homocysteine hydrolase.

Authors:  Masaaki Ishihara; Yoshio Kusakabe; Tsuyoshi Ohsumichi; Nobutada Tanaka; Masayuki Nakanishi; Yukio Kitade; Kazuo T Nakamura
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-02-24

Review 5.  Methionine metabolism and methyltransferases in the regulation of aging and lifespan extension across species.

Authors:  Andrey A Parkhitko; Patrick Jouandin; Stephanie E Mohr; Norbert Perrimon
Journal:  Aging Cell       Date:  2019-08-28       Impact factor: 9.304

Review 6.  Functional and Pathological Roles of AHCY.

Authors:  Pedro Vizán; Luciano Di Croce; Sergi Aranda
Journal:  Front Cell Dev Biol       Date:  2021-03-31

7.  Co-silencing of tomato S-adenosylhomocysteine hydrolase genes confers increased immunity against Pseudomonas syringae pv. tomato DC3000 and enhanced tolerance to drought stress.

Authors:  Xiaohui Li; Lei Huang; Yongbo Hong; Yafen Zhang; Shixia Liu; Dayong Li; Huijuan Zhang; Fengming Song
Journal:  Front Plant Sci       Date:  2015-09-08       Impact factor: 5.753

Review 8.  S-adenosyl-L-homocysteine hydrolase and methylation disorders: yeast as a model system.

Authors:  Oksana Tehlivets; Nermina Malanovic; Myriam Visram; Tea Pavkov-Keller; Walter Keller
Journal:  Biochim Biophys Acta       Date:  2012-09-24

9.  Crystallographic and SAXS studies of S-adenosyl-l-homocysteine hydrolase from Bradyrhizobium elkanii.

Authors:  Tomasz Manszewski; Kamil Szpotkowski; Mariusz Jaskolski
Journal:  IUCrJ       Date:  2017-04-10       Impact factor: 4.769

10.  S-Adenosyl-L-Homocysteine Hydrolase Inhibition by a Synthetic Nicotinamide Cofactor Biomimetic.

Authors:  Lyn L Kailing; Daniela Bertinetti; Caroline E Paul; Tomasz Manszewski; Mariusz Jaskolski; Friedrich W Herberg; Ioannis V Pavlidis
Journal:  Front Microbiol       Date:  2018-03-21       Impact factor: 5.640

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