Literature DB >> 18593992

Persistent aberrations in circulating DNA integrity after radiotherapy are associated with poor prognosis in nasopharyngeal carcinoma patients.

K C Allen Chan1, Sing-Fai Leung, Sze-Wan Yeung, Anthony T C Chan, Y M Dennis Lo.   

Abstract

PURPOSE: Aberrations of circulating nucleic acid integrity have been observed in cancer patients. However, the clinical significance of such changes has not been completely elucidated. In this study, we investigated the plasma DNA integrity in nasopharyngeal carcinoma (NPC) patients and its association with patients' survival after radiotherapy. EXPERIMENTAL
DESIGN: Plasma DNA integrity was analyzed for 105 NPC patients before and after curative-intent radiotherapy and for 40 healthy controls. The plasma DNA concentration of each sample was measured by two real-time PCRs targeting the leptin gene. The amplicon sizes of the two assays were 105 and 201 bp. The integrity index was calculated as the ratio of the two concentrations (201 bp/105 bp). More intact circulating DNA would give a higher integrity index.
RESULTS: The plasma DNA integrity index of the NPC patients was significantly higher than that of the healthy controls (median, 0.356 versus 0.238; P < 0.001). After radiotherapy, a reduction in plasma DNA integrity index was observed in 70% NPC patients. Patients with persistent aberrations of plasma DNA integrity had significantly poorer survival probability than those with reduced DNA integrity after treatment (P < 0.001, Kaplan-Meier).
CONCLUSIONS: NPC is associated with disturbances in the integrity of circulating cell-free DNA. The persistence of DNA integrity aberrations after radiotherapy is associated with reduced probability of disease-free survival. Therefore, the measurement of plasma DNA integrity may serve as a useful marker for the detection and monitoring of malignant diseases.

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Year:  2008        PMID: 18593992     DOI: 10.1158/1078-0432.CCR-08-0182

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  25 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

Review 2.  Cell-free nucleic acids as biomarkers in cancer patients.

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3.  Size-based molecular diagnostics using plasma DNA for noninvasive prenatal testing.

Authors:  Stephanie C Y Yu; K C Allen Chan; Yama W L Zheng; Peiyong Jiang; Gary J W Liao; Hao Sun; Ranjit Akolekar; Tak Y Leung; Attie T J I Go; John M G van Vugt; Ryoko Minekawa; Cees B M Oudejans; Kypros H Nicolaides; Rossa W K Chiu; Y M Dennis Lo
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-19       Impact factor: 11.205

4.  Decoding circulating nucleic acids in human serum using microfluidic single molecule spectroscopy.

Authors:  Kelvin J Liu; Malcolm V Brock; Ie-Ming Shih; Tza-Huei Wang
Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

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6.  Normal and Cancerous Tissues Release Extrachromosomal Circular DNA (eccDNA) into the Circulation.

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Journal:  Tumour Biol       Date:  2012-12-27

Review 8.  Stance of MRD in Non-Hodgkin's Lymphoma and its upsurge in the novel era of cell-free DNA.

Authors:  S Garg; A Kumar; R Gupta
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9.  Seasonal variation in TP53 R249S-mutated serum DNA with aflatoxin exposure and hepatitis B virus infection.

Authors:  Stéphanie Villar; Emilie Le Roux-Goglin; Doriane A Gouas; Amelie Plymoth; Gilles Ferro; Mathieu Boniol; Myriam Lereau; Ebrima Bah; Andrew J Hall; Christopher P Wild; Maimuna Mendy; Helene Norder; Marianne van der Sande; Hilton Whittle; Marlin D Friesen; John D Groopman; Pierre Hainaut
Journal:  Environ Health Perspect       Date:  2011-07-18       Impact factor: 9.031

10.  Pleural fluid cell-free DNA integrity index to identify cytologically negative malignant pleural effusions including mesotheliomas.

Authors:  Krishna B Sriram; Vandana Relan; Belinda E Clarke; Edwina E Duhig; Morgan N Windsor; Kevin S Matar; Rishendran Naidoo; Linda Passmore; Elizabeth McCaul; Deborah Courtney; Ian A Yang; Rayleen V Bowman; Kwun M Fong
Journal:  BMC Cancer       Date:  2012-09-25       Impact factor: 4.430

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