Literature DB >> 18593872

Signaling silence--breaking ground and spreading out.

Hye Ryun Woo1, Eric J Richards.   

Abstract

Among the persistent mysteries in epigenetics are the criteria by which specific regions of the genome are chosen for deposition of distinguishing chromatin marks. Once a particular region is modified, will the newly acquired epigenetic state spill onto neighboring regions of the genome or be confined to tidy patches? The report by Henderson and Jacobsen in the the previous issue of Genes & Development (1597-1606) addresses these questions while providing insight into the utility of DNA methylation for a eukaryotic genome.

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Year:  2008        PMID： 18593872      PMCID： PMC2732421          DOI： 10.1101/gad.1694608

Source DB:  PubMed          Journal:  Genes Dev        ISSN： 0890-9369            Impact factor:   11.361


  35 in total

1.  Specific differentially methylated domain sequences direct the maintenance of methylation at imprinted genes.

Authors:  Bonnie Reinhart; Ariane Paoloni-Giacobino; J Richard Chaillet
Journal:  Mol Cell Biol       Date:  2006-09-05       Impact factor: 4.272

Review 2.  RNA-mediated transcriptional gene silencing in human cells.

Authors:  Kevin V Morris
Journal:  Curr Top Microbiol Immunol       Date:  2008       Impact factor: 4.291

3.  Small RNA guides for de novo DNA methylation in mammalian germ cells.

Authors:  Alexei A Aravin; Déborah Bourc'his
Journal:  Genes Dev       Date:  2008-04-15       Impact factor: 11.361

4.  DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes.

Authors:  Satomi Kuramochi-Miyagawa; Toshiaki Watanabe; Kengo Gotoh; Yasushi Totoki; Atsushi Toyoda; Masahito Ikawa; Noriko Asada; Kanako Kojima; Yuka Yamaguchi; Takashi W Ijiri; Kenichiro Hata; En Li; Yoichi Matsuda; Tohru Kimura; Masaru Okabe; Yoshiyuki Sakaki; Hiroyuki Sasaki; Toru Nakano
Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

5.  Daxx represses RelB target promoters via DNA methyltransferase recruitment and DNA hypermethylation.

Authors:  Lorena A Puto; John C Reed
Journal:  Genes Dev       Date:  2008-04-15       Impact factor: 11.361

6.  Heritable epigenetic mutation of a transposon-flanked Arabidopsis gene due to lack of the chromatin-remodeling factor DDM1.

Authors:  Hidetoshi Saze; Tetsuji Kakutani
Journal:  EMBO J       Date:  2007-07-12       Impact factor: 11.598

7.  RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis.

Authors:  Simon W-L Chan; Ian R Henderson; Xiaoyu Zhang; Govind Shah; Jason S-C Chien; Steven E Jacobsen
Journal:  PLoS Genet       Date:  2006-06-02       Impact factor: 5.917

8.  Two-step recruitment of RNA-directed DNA methylation to tandem repeats.

Authors:  Simon W-L Chan; Xiaoyu Zhang; Yana V Bernatavichute; Steven E Jacobsen
Journal:  PLoS Biol       Date:  2006-11       Impact factor: 8.029

9.  Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.

Authors:  Shawn J Cokus; Suhua Feng; Xiaoyu Zhang; Zugen Chen; Barry Merriman; Christian D Haudenschild; Sriharsa Pradhan; Stanley F Nelson; Matteo Pellegrini; Steven E Jacobsen
Journal:  Nature       Date:  2008-02-17       Impact factor: 49.962

10.  Evolution and control of imprinted FWA genes in the genus Arabidopsis.

Authors:  Ryo Fujimoto; Yuki Kinoshita; Akira Kawabe; Tetsu Kinoshita; Kazuya Takashima; Magnus Nordborg; Mikhail E Nasrallah; Kentaro K Shimizu; Hiroshi Kudoh; Tetsuji Kakutani
Journal:  PLoS Genet       Date:  2008-04-04       Impact factor: 5.917
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  3 in total

1.  A stepwise pathway for biogenesis of 24-nt secondary siRNAs and spreading of DNA methylation.

Authors:  Lucia Daxinger; Tatsuo Kanno; Etienne Bucher; Johannes van der Winden; Ulf Naumann; Antonius J M Matzke; Marjori Matzke
Journal:  EMBO J       Date:  2008-12-11       Impact factor: 11.598

2.  Transgenerational maintenance of transgene body CG but not CHG and CHH methylation.

Authors:  Athanasios Dalakouras; Elena Dadami; Michele Zwiebel; Gabi Krczal; Michael Wassenegger
Journal:  Epigenetics       Date:  2012-08-06       Impact factor: 4.528

3.  Multifunctional enhancers regulate mouse and human vitamin D receptor gene transcription.

Authors:  Lee A Zella; Mark B Meyer; Robert D Nerenz; Seong Min Lee; Melissa L Martowicz; J Wesley Pike
Journal:  Mol Endocrinol       Date:  2009-11-06
  3 in total

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