Literature DB >> 18413711

Small RNA guides for de novo DNA methylation in mammalian germ cells.

Alexei A Aravin1, Déborah Bourc'his.   

Abstract

Germline genomic methylation is essential for gamete identity and integrity in mammals. The study by Kuramochi-Miyagawa and colleagues (908-917) in the previous issue of Genes & Development links the process of DNA methylation-dependent repression of retrotranspons with the presence of piwi-interacting RNAs (piRNAs) in fetal male germ cells undergoing de novo methylation.

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Year:  2008        PMID： 18413711      PMCID： PMC2732394          DOI： 10.1101/gad.1669408

Source DB:  PubMed          Journal:  Genes Dev        ISSN： 0890-9369            Impact factor:   11.361


  44 in total

1.  A novel class of small RNAs bind to MILI protein in mouse testes.

Authors:  Alexei Aravin; Dimos Gaidatzis; Sébastien Pfeffer; Mariana Lagos-Quintana; Pablo Landgraf; Nicola Iovino; Patricia Morris; Michael J Brownstein; Satomi Kuramochi-Miyagawa; Toru Nakano; Minchen Chien; James J Russo; Jingyue Ju; Robert Sheridan; Chris Sander; Mihaela Zavolan; Thomas Tuschl
Journal:  Nature       Date:  2006-06-04       Impact factor: 49.962

2.  A germline-specific class of small RNAs binds mammalian Piwi proteins.

Authors:  Angélique Girard; Ravi Sachidanandam; Gregory J Hannon; Michelle A Carmell
Journal:  Nature       Date:  2006-06-04       Impact factor: 49.962

3.  Lsh is involved in de novo methylation of DNA.

Authors:  Heming Zhu; Theresa M Geiman; Sichuan Xi; Qiong Jiang; Anja Schmidtmann; Taiping Chen; En Li; Kathrin Muegge
Journal:  EMBO J       Date:  2006-01-05       Impact factor: 11.598

4.  L1 retrotransposition in nondividing and primary human somatic cells.

Authors:  Shuji Kubo; Maria Del Carmen Seleme; Harris S Soifer; José Luis Garcia Perez; John V Moran; Haig H Kazazian; Noriyuki Kasahara
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-12       Impact factor: 11.205

Review 5.  Gamete imprinting: setting epigenetic patterns for the next generation.

Authors:  Jacquetta M Trasler
Journal:  Reprod Fertil Dev       Date:  2006       Impact factor: 2.311

6.  Large-scale structure of genomic methylation patterns.

Authors:  Robert A Rollins; Fatemeh Haghighi; John R Edwards; Rajdeep Das; Michael Q Zhang; Jingyue Ju; Timothy H Bestor
Journal:  Genome Res       Date:  2005-12-19       Impact factor: 9.043

7.  Differences in DNA methylation during oogenesis and spermatogenesis and their persistence during early embryogenesis in the mouse.

Authors:  J P Sanford; H J Clark; V M Chapman; J Rossant
Journal:  Genes Dev       Date:  1987-12       Impact factor: 11.361

8.  Evolution of the vertebrate DNMT3 gene family: a possible link between existence of DNMT3L and genomic imprinting.

Authors:  T Yokomine; K Hata; M Tsudzuki; H Sasaki
Journal:  Cytogenet Genome Res       Date:  2006       Impact factor: 1.636

9.  Adult mice cloned from migrating primordial germ cells.

Authors:  Yukiko Yamazaki; Eleanor W Low; Yusuke Marikawa; Kazuhiro Iwahashi; Marisa S Bartolomei; John R McCarrey; Ryuzo Yanagimachi
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-29       Impact factor: 11.205

10.  Retroviral elements and their hosts: insertional mutagenesis in the mouse germ line.

Authors:  Irina A Maksakova; Mark T Romanish; Liane Gagnier; Catherine A Dunn; Louie N van de Lagemaat; Dixie L Mager
Journal:  PLoS Genet       Date:  2006-01       Impact factor: 5.917
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  67 in total

1.  Antisense tools for functional studies of human Argonaute proteins.

Authors:  Alessandra Mescalchin; Anke Detzer; Ulrike Weirauch; Maximilian J Hahnel; Christina Engel; Georg Sczakiel
Journal:  RNA       Date:  2010-10-08       Impact factor: 4.942

Review 2.  The developmental origins of the mammalian ovarian reserve.

Authors:  Kathryn J Grive; Richard N Freiman
Journal:  Development       Date:  2015-08-01       Impact factor: 6.868

3.  Two Piwi proteins, Xiwi and Xili, are expressed in the Xenopus female germline.

Authors:  Anna Wilczynska; Nicola Minshall; Javier Armisen; Eric A Miska; Nancy Standart
Journal:  RNA       Date:  2009-02       Impact factor: 4.942

4.  Expression profiling reveals developmentally regulated lncRNA repertoire in the mouse male germline.

Authors:  Jianqiang Bao; Jingwen Wu; Andrew S Schuster; Grant W Hennig; Wei Yan
Journal:  Biol Reprod       Date:  2013-11-07       Impact factor: 4.285

Review 5.  Mammalian cytosine methylation at a glance.

Authors:  Steen K T Ooi; Anne H O'Donnell; Timothy H Bestor
Journal:  J Cell Sci       Date:  2009-08-15       Impact factor: 5.285

6.  Zili is required for germ cell differentiation and meiosis in zebrafish.

Authors:  Saskia Houwing; Eugene Berezikov; René F Ketting
Journal:  EMBO J       Date:  2008-10-02       Impact factor: 11.598

7.  Signaling silence--breaking ground and spreading out.

Authors:  Hye Ryun Woo; Eric J Richards
Journal:  Genes Dev       Date:  2008-07-01       Impact factor: 11.361

8.  Reduced pachytene piRNAs and translation underlie spermiogenic arrest in Maelstrom mutant mice.

Authors:  Julio Castañeda; Pavol Genzor; Godfried W van der Heijden; Ali Sarkeshik; John R Yates; Nicholas T Ingolia; Alex Bortvin
Journal:  EMBO J       Date:  2014-07-25       Impact factor: 11.598

Review 9.  Minireview: The roles of small RNA pathways in reproductive medicine.

Authors:  Shannon M Hawkins; Gregory M Buchold; Martin M Matzuk
Journal:  Mol Endocrinol       Date:  2011-05-05

10.  ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis.

Authors:  Xianwu Zheng; Olga Pontes; Jianhua Zhu; Daisuke Miki; Fei Zhang; Wen-Xue Li; Kei Iida; Avnish Kapoor; Craig S Pikaard; Jian-Kang Zhu
Journal:  Nature       Date:  2008-09-24       Impact factor: 49.962
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