Literature DB >> 18593164

Cold denaturation of yeast frataxin offers the clue to understand the effect of alcohols on protein stability.

Stephen R Martin1, Veronica Esposito, Paolo De Los Rios, Annalisa Pastore, Piero Andrea Temussi.   

Abstract

Although alcohols are well-known to be protein denaturants when present at high concentrations, their effect on proteins at low concentrations is much less well characterized. In this paper, we present a study of the effects of alcohols on protein stability using Yfh1, the yeast ortholog of the human protein frataxin. Exploiting the unusual property of this protein of undergoing cold denaturation around 0 degrees C without any ad hoc destabilization, we determined the stability curve on the basis of both high and low temperature unfolding in the presence of three commonly used alcohols: trifluoroethanol, ethanol, and methanol. In all cases, we observed an extended temperature range of protein stability as determined by a modest increase of the high temperature of unfolding but an appreciable decrease in the low temperature of unfolding. On the basis of simple thermodynamic considerations, we are able to interpret the literature on the effects of alcohols on proteins and to generalize our findings. We suggest that alcohols, at low concentration and physiological pH, stabilize proteins by greatly widening the range of temperatures over which the protein is stable. Our results also clarify the molecular mechanism of the interaction and validate the current theoretical interpretation of the mechanism of cold denaturation.

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Year:  2008        PMID: 18593164     DOI: 10.1021/ja803280e

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  The Unfolded State of the C-Terminal Domain of L9 Expands at Low but Not at Elevated Temperatures.

Authors:  Natalie E Stenzoski; Bowu Luan; Alex S Holehouse; Daniel P Raleigh
Journal:  Biophys J       Date:  2018-07-23       Impact factor: 4.033

Review 2.  Interaction of proteins with ionic liquid, alcohol and DMSO and in situ generation of gold nano-clusters in a cell.

Authors:  Somen Nandi; Sridip Parui; Ritaban Halder; Biman Jana; Kankan Bhattacharyya
Journal:  Biophys Rev       Date:  2017-11-16

3.  The cold denatured state of the C-terminal domain of protein L9 is compact and contains both native and non-native structure.

Authors:  Bing Shan; Sebastian McClendon; Carla Rospigliosi; David Eliezer; Daniel P Raleigh
Journal:  J Am Chem Soc       Date:  2010-04-07       Impact factor: 15.419

4.  ELISA assays and alcohol: increasing carbon chain length can interfere with detection of cytokines.

Authors:  Kristine von Maltzan; Stephen B Pruett
Journal:  Alcohol       Date:  2010-09-16       Impact factor: 2.405

Review 5.  Ethanol stress responses in Kluyveromyces marxianus: current knowledge and perspectives.

Authors:  Maurício Alexander de Moura Ferreira; Fernando Augusto da Silveira; Wendel Batista da Silveira
Journal:  Appl Microbiol Biotechnol       Date:  2022-01-29       Impact factor: 4.813

6.  Assessing the accuracy of the general AMBER force field for 2,2,2-trifluoroethanol as solvent.

Authors:  Xiangyu Jia; John Z H Zhang; Ye Mei
Journal:  J Mol Model       Date:  2013-02-10       Impact factor: 1.810

7.  Heat and cold denaturation of yeast frataxin: The effect of pressure.

Authors:  Rita Puglisi; Patrizia Cioni; Edi Gabellieri; Gianluca Presciuttini; Annalisa Pastore; Piero Andrea Temussi
Journal:  Biophys J       Date:  2022-03-09       Impact factor: 3.699

8.  Trapping a salt-dependent unfolding intermediate of the marginally stable protein Yfh1.

Authors:  Bartolomé Vilanova; Domenico Sanfelice; Gabriel Martorell; Piero A Temussi; Annalisa Pastore
Journal:  Front Mol Biosci       Date:  2014-09-30

9.  On the Effect of Sodium Chloride and Sodium Sulfate on Cold Denaturation.

Authors:  Andrea Pica; Giuseppe Graziano
Journal:  PLoS One       Date:  2015-07-21       Impact factor: 3.240

10.  "Invisible" conformers of an antifungal disulfide protein revealed by constrained cold and heat unfolding, CEST-NMR experiments, and molecular dynamics calculations.

Authors:  Ádám Fizil; Zoltán Gáspári; Terézia Barna; Florentine Marx; Gyula Batta
Journal:  Chemistry       Date:  2015-02-12       Impact factor: 5.236

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