Literature DB >> 18590305

Retinal models: comparison of electronic absorption spectra in the gas phase and in methanol solution.

Aurora Muñoz-Losa1, Ignacio Fdez Galván, Manuel A Aguilar, M Elena Martín.   

Abstract

An accurate study on several models of the 11-cis-retinal protonated Schiff base (PSB) has been performed both in vacuo and in methanol solution. Condensed phase calculations have been carried out making use of the ASEP/MD method, which permits the employment of the same high-level ab initio calculations usually applied in gas phase studies as well as a detailed description of the solvent structure around the solute through molecular dynamics simulations of the complete system. The solute structure was completely optimized in vacuo and in solution at the CASSCF level and/or MP2 level, and the CASPT2 method was applied for the calculation of the vertical transition energies and solvent shift values. Our results reproduce and explain the main features of the experimental absorption spectra of the 11-cis-retinal PSB. Two well-resolved bands can be identified in vacuo (separated by roughly 1.0 eV), whereas only a single broad band is observed in solution. This fact is explained by the existence of two almost degenerate excited states in methanol. The inclusion of two methyl groups at the iminium end of the system permits the reproduction of the experimental solvent shift value.

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Year:  2008        PMID: 18590305     DOI: 10.1021/jp800244h

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  2 in total

1.  Light activation of the isomerization and deprotonation of the protonated Schiff base retinal.

Authors:  Carlos Kubli-Garfias; Karim Salazar-Salinas; Emily C Perez-Angel; Jorge M Seminario
Journal:  J Mol Model       Date:  2011-01-05       Impact factor: 1.810

2.  Fluorescence Enhancement of a Microbial Rhodopsin via Electronic Reprogramming.

Authors:  María Del Carmen Marín; Damianos Agathangelou; Yoelvis Orozco-Gonzalez; Alessio Valentini; Yoshitaka Kato; Rei Abe-Yoshizumi; Hideki Kandori; Ahreum Choi; Kwang-Hwan Jung; Stefan Haacke; Massimo Olivucci
Journal:  J Am Chem Soc       Date:  2018-12-28       Impact factor: 15.419

  2 in total

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