Literature DB >> 18587654

The recent origin of the Sdic gene cluster in the melanogaster subgroup.

Rita Ponce1.   

Abstract

Gene families are composed of closely related genes and are an important part of eukaryotic genomes. In the proximal region of the X chromosome of Drosophila melanogaster there is a cluster of four tandem Sdic genes, located between the gene Cdic and the gene AnnX. Sdic is a chimeric gene that encodes a novel protein with sperm-specific expression. It had been hypothesized that the Sdic gene cluster was formed after the split of D. melanogaster and D. simulans. To study the evolution of this cluster, the sequence of this region was studied in several Drosophilidae species. In all species analyzed, Sdic genes are absent and AnnX and Cdic are adjacent to each other. The results allowed the inference of the ancestral situation and the reconstruction of the evolution of the cluster, and confirm that the Sdic cluster was indeed formed in the lineage that gave rise to D. melanogaster, being one of the youngest gene clusters known.

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Year:  2008        PMID: 18587654     DOI: 10.1007/s10709-008-9288-0

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  12 in total

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4.  Molecular evolution of the ocnus and janus genes in the Drosophila melanogaster species subgroup.

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Journal:  Mol Biol Evol       Date:  2001-05       Impact factor: 16.240

5.  The evolution of the novel Sdic gene cluster in Drosophila melanogaster.

Authors:  Rita Ponce; Daniel L Hartl
Journal:  Gene       Date:  2006-06-12       Impact factor: 3.688

6.  The use of a non-LTR element to date the formation of the Sdic gene cluster.

Authors:  Rita Ponce
Journal:  Genetica       Date:  2007-03-10       Impact factor: 1.082

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Authors:  Ryan D Morin; Elbert Chang; Anca Petrescu; Nancy Liao; Malachi Griffith; William Chow; Robert Kirkpatrick; Yaron S Butterfield; Alice C Young; Jeffrey Stott; Sarah Barber; Ryan Babakaiff; Mark C Dickson; Corey Matsuo; David Wong; George S Yang; Duane E Smailus; Keith D Wetherby; Peggy N Kwong; Jane Grimwood; Charles P Brinkley; Mabel Brown-John; Natalie D Reddix-Dugue; Michael Mayo; Jeremy Schmutz; Jaclyn Beland; Morgan Park; Susan Gibson; Teika Olson; Gerard G Bouffard; Miranda Tsai; Ruth Featherstone; Steve Chand; Asim S Siddiqui; Wonhee Jang; Ed Lee; Steven L Klein; Robert W Blakesley; Barry R Zeeberg; Sudarshan Narasimhan; John N Weinstein; Christa Prange Pennacchio; Richard M Myers; Eric D Green; Lukas Wagner; Daniela S Gerhard; Marco A Marra; Steven J M Jones; Robert A Holt
Journal:  Genome Res       Date:  2006-05-03       Impact factor: 9.043

8.  Origin and evolution of a new gene expressed in the Drosophila sperm axoneme.

Authors:  José María Ranz; Ana Rita Ponce; Daniel L Hartl; Dmitry Nurminsky
Journal:  Genetica       Date:  2003-07       Impact factor: 1.082

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Authors:  D I Nurminsky; M V Nurminskaya; D De Aguiar; D L Hartl
Journal:  Nature       Date:  1998-12-10       Impact factor: 49.962

10.  Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

Authors:  Susan E Celniker; David A Wheeler; Brent Kronmiller; Joseph W Carlson; Aaron Halpern; Sandeep Patel; Mark Adams; Mark Champe; Shannon P Dugan; Erwin Frise; Ann Hodgson; Reed A George; Roger A Hoskins; Todd Laverty; Donna M Muzny; Catherine R Nelson; Joanne M Pacleb; Soo Park; Barret D Pfeiffer; Stephen Richards; Erica J Sodergren; Robert Svirskas; Paul E Tabor; Kenneth Wan; Mark Stapleton; Granger G Sutton; Craig Venter; George Weinstock; Steven E Scherer; Eugene W Myers; Richard A Gibbs; Gerald M Rubin
Journal:  Genome Biol       Date:  2002-12-23       Impact factor: 13.583

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  3 in total

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2.  On the genetic basis of the effect of Spiroplasma on the male reproductive fitness of Glossina fuscipes fuscipes.

Authors:  Edward Oropeza-Rodriguez; Bryan D Clifton; José M Ranz
Journal:  PLoS Pathog       Date:  2022-04-04       Impact factor: 6.823

3.  Functional relevance of the newly evolved sperm dynein intermediate chain multigene family in Drosophila melanogaster males.

Authors:  Shu-Dan Yeh; Tiffanie Do; Mashya Abbassi; José M Ranz
Journal:  Commun Integr Biol       Date:  2012-09-01
  3 in total

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