Literature DB >> 18586677

Growth hormone deficiency and splicing fidelity: two serine/arginine-rich proteins, ASF/SF2 and SC35, act antagonistically.

Amanda S Solis1, Rui Peng, J Barrett Crawford, John A Phillips, James G Patton.   

Abstract

The majority of mutations that cause isolated growth hormone deficiency type II are the result of aberrant splicing of transcripts encoding human growth hormone. Such mutations increase skipping of exon 3 and encode a 17.5-kDa protein that acts as a dominant negative to block secretion of full-length protein produced from unaffected alleles. Previously, we identified a splicing regulatory element in exon 3 (exonic splicing enhancer 2 (ESE2)), but we had not determined the molecular mechanism by which this element prevents exon skipping. Here, we show that two members of the serine/arginine-rich (SR) protein superfamily (ASF/SF2 and SC35) act antagonistically to regulate exon 3 splicing. ASF/SF2 activates exon 3 inclusion, but SC35, acting through a region just downstream of ESE2, can block such activation. These findings explain the disease-causing mechanism of a patient mutation in ESE2 that creates a functional SC35-binding site that then acts synergistically with the downstream SC35 site to produce pathological levels of exon 3 skipping. Although the precedent for SR proteins acting as repressors is established, this is the first example of a patient mutation that creates a site through which an SR protein represses splicing.

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Year:  2008        PMID: 18586677      PMCID: PMC2527097          DOI: 10.1074/jbc.M710175200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  34 in total

1.  Molecular cloning of cDNA encoding 20 kDa variant human growth hormone and the alternative splicing mechanism.

Authors:  N Masuda; M Watahiki; M Tanaka; M Yamakawa; K Shimizu; J Nagai; K Nakashima
Journal:  Biochim Biophys Acta       Date:  1988-01-25

2.  A new natural hGH variant--17.5 kd--produced by alternative splicing. An additional consensus sequence which might play a role in branchpoint selection.

Authors:  C M Lecomte; A Renard; J A Martial
Journal:  Nucleic Acids Res       Date:  1987-08-25       Impact factor: 16.971

3.  Pre-mRNA splicing in the absence of an SR protein RS domain.

Authors:  J Zhu; A R Krainer
Journal:  Genes Dev       Date:  2000-12-15       Impact factor: 11.361

4.  An exon splice enhancer mutation causes autosomal dominant GH deficiency.

Authors:  Chanda T Moseley; Primus E Mullis; Melissa A Prince; John A Phillips
Journal:  J Clin Endocrinol Metab       Date:  2002-02       Impact factor: 5.958

5.  Disruption of exon definition produces a dominant-negative growth hormone isoform that causes somatotroph death and IGHD II.

Authors:  Robin C C Ryther; Lindsay M McGuinness; John A Phillips; Chanda T Moseley; Charalambos B Magoulas; Iain C A F Robinson; James G Patton
Journal:  Hum Genet       Date:  2003-04-29       Impact factor: 4.132

6.  hnRNP A1 and the SR proteins ASF/SF2 and SC35 have antagonistic functions in splicing of beta-tropomyosin exon 6B.

Authors:  Alain Expert-Bezançon; Alain Sureau; Patrice Durosay; Roland Salesse; Herman Groeneveld; Jean Pierre Lecaer; Joëlle Marie
Journal:  J Biol Chem       Date:  2004-06-18       Impact factor: 5.157

7.  ESEfinder: A web resource to identify exonic splicing enhancers.

Authors:  Luca Cartegni; Jinhua Wang; Zhengwei Zhu; Michael Q Zhang; Adrian R Krainer
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

8.  Novel mutations of the growth hormone 1 (GH1) gene disclosed by modulation of the clinical selection criteria for individuals with short stature.

Authors:  David S Millar; Mark D Lewis; Martin Horan; Vicky Newsway; Tammy E Easter; John W Gregory; Linda Fryklund; Martin Norin; Elizabeth C Crowne; Sally J Davies; Phillip Edwards; Jeremy Kirk; Kim Waldron; Patricia J Smith; John A Phillips; Maurice F Scanlon; Michael Krawczak; David N Cooper; Annie M Procter
Journal:  Hum Mutat       Date:  2003-04       Impact factor: 4.878

9.  Human growth hormone DNA sequence and mRNA structure: possible alternative splicing.

Authors:  F M DeNoto; D D Moore; H M Goodman
Journal:  Nucleic Acids Res       Date:  1981-08-11       Impact factor: 16.971

10.  GH1 splicing is regulated by multiple enhancers whose mutation produces a dominant-negative GH isoform that can be degraded by allele-specific small interfering RNA (siRNA).

Authors:  Robin C C Ryther; Alex S Flynt; Bryan D Harris; John A Phillips; James G Patton
Journal:  Endocrinology       Date:  2004-02-26       Impact factor: 4.736

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  12 in total

1.  A syn-anti conformational difference allows SRSF2 to recognize guanines and cytosines equally well.

Authors:  Gerrit M Daubner; Antoine Cléry; Sandrine Jayne; James Stevenin; Frédéric H-T Allain
Journal:  EMBO J       Date:  2011-10-14       Impact factor: 11.598

2.  Antagonistic roles of four SR proteins in the biosynthesis of alternatively spliced tissue factor transcripts in monocytic cells.

Authors:  Sajiv Chandradas; Gintaras Deikus; Jonathan G Tardos; Vladimir Y Bogdanov
Journal:  J Leukoc Biol       Date:  2009-10-20       Impact factor: 4.962

3.  Regulation of alternative splicing within the supraspliceosome.

Authors:  Naama Sebbag-Sznajder; Oleg Raitskin; Minna Angenitzki; Taka-Aki Sato; Joseph Sperling; Ruth Sperling
Journal:  J Struct Biol       Date:  2011-11-12       Impact factor: 2.867

4.  SR proteins induce alternative exon skipping through their activities on the flanking constitutive exons.

Authors:  Joonhee Han; Jian-Hua Ding; Cheol W Byeon; Jee H Kim; Klemens J Hertel; Sunjoo Jeong; Xiang-Dong Fu
Journal:  Mol Cell Biol       Date:  2010-12-06       Impact factor: 4.272

5.  Atypical retinal degeneration 3 in mice is caused by defective PDE6B pre-mRNA splicing.

Authors:  Hakim Muradov; Kimberly K Boyd; Vasily Kerov; Nikolai O Artemyev
Journal:  Vision Res       Date:  2012-02-04       Impact factor: 1.886

Review 6.  Regulation of splicing by SR proteins and SR protein-specific kinases.

Authors:  Zhihong Zhou; Xiang-Dong Fu
Journal:  Chromosoma       Date:  2013-03-24       Impact factor: 4.316

7.  Testing for natural selection in human exonic splicing regulators associated with evolutionary rate shifts.

Authors:  Rodrigo F Ramalho; Sahar Gelfman; Jorge E de Souza; Gil Ast; Sandro J de Souza; Diogo Meyer
Journal:  J Mol Evol       Date:  2013-03-26       Impact factor: 2.395

8.  The exon 29 c.3535A>T in the alpha-2-macroglobulin gene causing aberrant splice variants is associated with mastitis in dairy cattle.

Authors:  Xiuge Wang; Jinming Huang; Lihong Zhao; Changfa Wang; Zhihua Ju; Qiuling Li; Chao Qi; Yan Zhang; Zebin Zhang; Wei Zhang; Minghai Hou; Jinduo Yuan; Jifeng Zhong
Journal:  Immunogenetics       Date:  2012-08-26       Impact factor: 2.846

9.  Isolated pseudo-RNA-recognition motifs of SR proteins can regulate splicing using a noncanonical mode of RNA recognition.

Authors:  Antoine Cléry; Rahul Sinha; Olga Anczuków; Anna Corrionero; Ahmed Moursy; Gerrit M Daubner; Juan Valcárcel; Adrian R Krainer; Frédéric H-T Allain
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-08       Impact factor: 11.205

10.  Genome-wide analysis reveals SR protein cooperation and competition in regulated splicing.

Authors:  Shatakshi Pandit; Yu Zhou; Lily Shiue; Gabriela Coutinho-Mansfield; Hairi Li; Jinsong Qiu; Jie Huang; Gene W Yeo; Manuel Ares; Xiang-Dong Fu
Journal:  Mol Cell       Date:  2013-04-04       Impact factor: 17.970

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