Literature DB >> 18583646

Beyond transcription factors: the role of chromatin modifying enzymes in regulating transcription required for memory.

Ruth M Barrett1, Marcelo A Wood.   

Abstract

One of the alluring aspects of examining chromatin modifications in the role of modulating transcription required for long-term memory processes is that these modifications may provide transient and potentially stable epigenetic marks in the service of activating and/or maintaining transcriptional processes. These, in turn, may ultimately participate in the molecular mechanisms required for neuronal changes subserving long-lasting changes in behavior. As an epigenetic mechanism of transcriptional control, chromatin modification has been shown to participate in maintaining cellular memory (e.g., cell fate) and may underlie the strengthening and maintenance of synaptic connections required for long-term changes in behavior. Epigenetics has become central to several fields of neurobiology, where researchers have found that regulation of chromatin modification has a significant role in epilepsy, drug addiction, depression, neurodegenerative diseases, and memory. In this review, we will discuss the role of chromatin modifying enzymes in memory processes, as well as how recent studies in yeast genetics and cancer biology may impact the way we think about how chromatin modification and chromatin remodeling regulate neuronal function.

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Year:  2008        PMID: 18583646      PMCID: PMC3960025          DOI: 10.1101/lm.917508

Source DB:  PubMed          Journal:  Learn Mem        ISSN: 1072-0502            Impact factor:   2.460


  89 in total

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Authors:  Jonathan M Levenson; J David Sweatt
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2.  Covalent modification of DNA regulates memory formation.

Authors:  Courtney A Miller; J David Sweatt
Journal:  Neuron       Date:  2007-03-15       Impact factor: 17.173

Review 3.  Epigenetic regulation in psychiatric disorders.

Authors:  Nadia Tsankova; William Renthal; Arvind Kumar; Eric J Nestler
Journal:  Nat Rev Neurosci       Date:  2007-05       Impact factor: 34.870

Review 4.  Crucial roles for chromatin dynamics in cellular memory.

Authors:  Susumu Hirose
Journal:  J Biochem       Date:  2007-04-06       Impact factor: 3.387

5.  Histone deacetylase 6 inhibition compensates for the transport deficit in Huntington's disease by increasing tubulin acetylation.

Authors:  Jim P Dompierre; Juliette D Godin; Bénédicte C Charrin; Fabrice P Cordelières; Stephen J King; Sandrine Humbert; Frédéric Saudou
Journal:  J Neurosci       Date:  2007-03-28       Impact factor: 6.167

6.  Transgenic mice expressing a truncated form of CREB-binding protein (CBP) exhibit deficits in hippocampal synaptic plasticity and memory storage.

Authors:  Marcelo A Wood; Michael P Kaplan; Alice Park; Edward J Blanchard; Ana M M Oliveira; Thomas L Lombardi; Ted Abel
Journal:  Learn Mem       Date:  2005 Mar-Apr       Impact factor: 2.460

7.  Recovery of learning and memory is associated with chromatin remodelling.

Authors:  Andre Fischer; Farahnaz Sananbenesi; Xinyu Wang; Matthew Dobbin; Li-Huei Tsai
Journal:  Nature       Date:  2007-04-29       Impact factor: 49.962

8.  Histone deacetylase inhibitors enhance memory and synaptic plasticity via CREB:CBP-dependent transcriptional activation.

Authors:  Christopher G Vecsey; Joshua D Hawk; K Matthew Lattal; Joel M Stein; Sara A Fabian; Michelle A Attner; Sara M Cabrera; Conor B McDonough; Paul K Brindle; Ted Abel; Marcelo A Wood
Journal:  J Neurosci       Date:  2007-06-06       Impact factor: 6.167

9.  Histone modifications around individual BDNF gene promoters in prefrontal cortex are associated with extinction of conditioned fear.

Authors:  Timothy W Bredy; Hao Wu; Cortney Crego; Jessica Zellhoefer; Yi E Sun; Mark Barad
Journal:  Learn Mem       Date:  2007-04-06       Impact factor: 2.460

10.  Phenylbutyrate increases SMN gene expression in spinal muscular atrophy patients.

Authors:  Christina Brahe; Tiziana Vitali; Francesco D Tiziano; Carla Angelozzi; Anna Maria Pinto; Federica Borgo; Umberto Moscato; Enrico Bertini; Eugenio Mercuri; Giovanni Neri
Journal:  Eur J Hum Genet       Date:  2005-02       Impact factor: 4.246

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  115 in total

1.  HDAC activity is required for BDNF to increase quantal neurotransmitter release and dendritic spine density in CA1 pyramidal neurons.

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Journal:  Hippocampus       Date:  2011-12-07       Impact factor: 3.899

2.  DNA methylation and memory formation.

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3.  Increasing histone acetylation in the hippocampus-infralimbic network enhances fear extinction.

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Journal:  Biol Psychiatry       Date:  2012-01-29       Impact factor: 13.382

Review 4.  Mechanisms of age-related cognitive change and targets for intervention: epigenetics.

Authors:  Kenneth S Kosik; Peter R Rapp; Naftali Raz; Scott A Small; J David Sweatt; Li-Huei Tsai
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5.  De novo nonsense mutations in KAT6A, a lysine acetyl-transferase gene, cause a syndrome including microcephaly and global developmental delay.

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Journal:  Am J Hum Genet       Date:  2015-02-26       Impact factor: 11.025

Review 6.  Epigenetics, oestradiol and hippocampal memory consolidation.

Authors:  K M Frick
Journal:  J Neuroendocrinol       Date:  2013-11       Impact factor: 3.627

7.  Activity-dependent Signaling and Epigenetic Abnormalities in Mice Exposed to Postnatal Ethanol.

Authors:  Shivakumar Subbanna; Vikram Joshi; Balapal S Basavarajappa
Journal:  Neuroscience       Date:  2018-07-20       Impact factor: 3.590

Review 8.  Molecular brake pad hypothesis: pulling off the brakes for emotional memory.

Authors:  Annie Vogel-Ciernia; Marcelo A Wood
Journal:  Rev Neurosci       Date:  2012       Impact factor: 4.353

9.  Epigenetic Regulation of SNAP25 Prevents Progressive Glutamate Excitotoxicty in Hypoxic CA3 Neurons.

Authors:  Suryanarayan Biswal; Debashree Das; Kalpana Barhwal; Ashish Kumar; Tapas Chandra Nag; Mahendra Kumar Thakur; Sunil Kumar Hota; Bhuvnesh Kumar
Journal:  Mol Neurobiol       Date:  2016-10-03       Impact factor: 5.590

Review 10.  Multiple roles of HDAC inhibition in neurodegenerative conditions.

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