Literature DB >> 18579409

How transcription factors program chromatin--lessons from studies of the regulation of myeloid-specific genes.

Constanze Bonifer1, Maarten Hoogenkamp, Hanna Krysinska, Hiromi Tagoh.   

Abstract

Hematopoietic stem cells exhibit a multi-lineage gene expression program, and this expression program is either maintained when these cells self-renew, or re-programmed when they differentiate. Both processes require the regulated expression of sequence-specific transcription factors and their interaction with the epigenetic regulatory machinery which programs the chromatin of hematopoietic genes in a cell type specific fashion. This article describes recent findings on the complexity of these molecular interactions and their consequences with respect to the regulation of cell fate decisions. We also describe recent findings from studies of genes expressed in the myeloid lineage (Pu.1 and csf1r) which highlight some of the molecular principles governing cell fate decisions at the epigenetic level.

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Year:  2008        PMID: 18579409     DOI: 10.1016/j.smim.2008.05.001

Source DB:  PubMed          Journal:  Semin Immunol        ISSN: 1044-5323            Impact factor:   11.130


  12 in total

Review 1.  Role of helix-loop-helix proteins during differentiation of erythroid cells.

Authors:  Archana Anantharaman; I-Ju Lin; Joeva Barrow; Shermi Y Liang; Jude Masannat; John Strouboulis; Suming Huang; Jörg Bungert
Journal:  Mol Cell Biol       Date:  2011-01-31       Impact factor: 4.272

Review 2.  Non-genetic heterogeneity of cells in development: more than just noise.

Authors:  Sui Huang
Journal:  Development       Date:  2009-12       Impact factor: 6.868

3.  Drosophila CtBP regulates proliferation and differentiation of eye precursors and complexes with Eyeless, Dachshund, Dan, and Danr during eye and antennal development.

Authors:  Chinh Q Hoang; Micheal E Burnett; Jennifer Curtiss
Journal:  Dev Dyn       Date:  2010-09       Impact factor: 3.780

4.  The Mi-2-like Smed-CHD4 gene is required for stem cell differentiation in the planarian Schmidtea mediterranea.

Authors:  M Lucila Scimone; Joshua Meisel; Peter W Reddien
Journal:  Development       Date:  2010-03-10       Impact factor: 6.868

Review 5.  Cancer attractors: a systems view of tumors from a gene network dynamics and developmental perspective.

Authors:  Sui Huang; Ingemar Ernberg; Stuart Kauffman
Journal:  Semin Cell Dev Biol       Date:  2009-07-10       Impact factor: 7.727

6.  Mutant Huntingtin promotes autonomous microglia activation via myeloid lineage-determining factors.

Authors:  Andrea Crotti; Christopher Benner; Bilal E Kerman; David Gosselin; Clotilde Lagier-Tourenne; Chiara Zuccato; Elena Cattaneo; Fred H Gage; Don W Cleveland; Christopher K Glass
Journal:  Nat Neurosci       Date:  2014-03-02       Impact factor: 24.884

7.  Systems-level dynamic analyses of fate change in murine embryonic stem cells.

Authors:  Rong Lu; Florian Markowetz; Richard D Unwin; Jeffrey T Leek; Edoardo M Airoldi; Ben D MacArthur; Alexander Lachmann; Roye Rozov; Avi Ma'ayan; Laurie A Boyer; Olga G Troyanskaya; Anthony D Whetton; Ihor R Lemischka
Journal:  Nature       Date:  2009-11-19       Impact factor: 49.962

8.  Predicting pancreas cell fate decisions and reprogramming with a hierarchical multi-attractor model.

Authors:  Joseph Xu Zhou; Lutz Brusch; Sui Huang
Journal:  PLoS One       Date:  2011-03-14       Impact factor: 3.240

9.  Dynamic Gene Regulatory Networks Drive Hematopoietic Specification and Differentiation.

Authors:  Debbie K Goode; Nadine Obier; M S Vijayabaskar; Michael Lie-A-Ling; Andrew J Lilly; Rebecca Hannah; Monika Lichtinger; Kiran Batta; Magdalena Florkowska; Rahima Patel; Mairi Challinor; Kirstie Wallace; Jane Gilmour; Salam A Assi; Pierre Cauchy; Maarten Hoogenkamp; David R Westhead; Georges Lacaud; Valerie Kouskoff; Berthold Göttgens; Constanze Bonifer
Journal:  Dev Cell       Date:  2016-02-25       Impact factor: 12.270

10.  FUSE binding protein 1 (FUBP1) expression is upregulated by T-cell acute lymphocytic leukemia protein 1 (TAL1) and required for efficient erythroid differentiation.

Authors:  Marlene Steiner; Lucas Schneider; Jasmin Yillah; Katharina Gerlach; Olga N Kuvardina; Annekarin Meyer; Alisa Maring; Halvard Bonig; Erhard Seifried; Martin Zörnig; Jörn Lausen
Journal:  PLoS One       Date:  2019-01-17       Impact factor: 3.240

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