Literature DB >> 18571437

A Bayesian framework to identify principal intravoxel diffusion profiles based on diffusion-weighted MR imaging.

Lester Melie-García1, Erick J Canales-Rodríguez, Yasser Alemán-Gómez, Ching-Po Lin, Yasser Iturria-Medina, Pedro A Valdés-Hernández.   

Abstract

In this paper we introduce a new method to characterize the intravoxel anisotropy based on diffusion-weighted imaging (DWI). The proposed solution, under a fully Bayesian formalism, deals with the problem of joint Bayesian Model selection and parameter estimation to reconstruct the principal diffusion profiles or primary fiber orientations in a voxel. We develop an efficient stochastic algorithm based on the reversible jump Markov chain Monte Carlo (RJMCMC) method in order to perform the Bayesian computation. RJMCMC is a good choice for this problem because of its ability to jump between models of different dimensionality. This methodology provides posterior estimates of the parameters of interest (fiber orientation, diffusivities etc) unconditional of the model assumed. It also gives an empirical posterior distribution of the number of primary nerve fiber orientations given the DWI data. Different probability maps can be assessed using this methodology: 1) the intravoxel fiber orientation map (or orientational distribution function) that gives the probability of finding a fiber in a particular spatial orientation; 2) a three-dimensional map of the probability of finding a particular number of fibers in each voxel; 3) a three-dimensional MaxPro (maximum probability) map that provides the most probable number of fibers for each voxel. In order to study the performance and reliability of the presented approach, we tested it on synthetic data; an ex-vivo phantom of intersecting capillaries; and DWI data from a human subject.

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Year:  2008        PMID: 18571437     DOI: 10.1016/j.neuroimage.2008.04.242

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  5 in total

1.  Linear transforms for Fourier data on the sphere: application to high angular resolution diffusion MRI of the brain.

Authors:  Justin P Haldar; Richard M Leahy
Journal:  Neuroimage       Date:  2013-01-24       Impact factor: 6.556

2.  Spherical Deconvolution of Multichannel Diffusion MRI Data with Non-Gaussian Noise Models and Spatial Regularization.

Authors:  Erick J Canales-Rodríguez; Alessandro Daducci; Stamatios N Sotiropoulos; Emmanuel Caruyer; Santiago Aja-Fernández; Joaquim Radua; Jesús M Yurramendi Mendizabal; Yasser Iturria-Medina; Lester Melie-García; Yasser Alemán-Gómez; Jean-Philippe Thiran; Salvador Sarró; Edith Pomarol-Clotet; Raymond Salvador
Journal:  PLoS One       Date:  2015-10-15       Impact factor: 3.240

3.  Quantitative histological validation of diffusion MRI fiber orientation distributions in the rat brain.

Authors:  Trygve B Leergaard; Nathan S White; Alex de Crespigny; Ingeborg Bolstad; Helen D'Arceuil; Jan G Bjaalie; Anders M Dale
Journal:  PLoS One       Date:  2010-01-07       Impact factor: 3.240

4.  Parametric representation of multiple white matter fascicles from cube and sphere diffusion MRI.

Authors:  Benoit Scherrer; Simon K Warfield
Journal:  PLoS One       Date:  2012-11-26       Impact factor: 3.240

5.  Three-dimensional Reconstruction of Peripheral Nerve Internal Fascicular Groups.

Authors:  Yingchun Zhong; Liping Wang; Jianghui Dong; Yi Zhang; Peng Luo; Jian Qi; Xiaolin Liu; Cory J Xian
Journal:  Sci Rep       Date:  2015-11-24       Impact factor: 4.379

  5 in total

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