Literature DB >> 18568846

AAA+ ATPases in the initiation of DNA replication.

Karl E Duderstadt1, James M Berger.   

Abstract

All cellular organisms and many viruses rely on large, multi-subunit molecular machines, termed replisomes, to ensure that genetic material is accurately duplicated for transmission from one generation to the next. Replisome assembly is facilitated by dedicated initiator proteins, which serve to both recognize replication origins and recruit requisite replisomal components to the DNA in a cell-cycle coordinated manner. Exactly how imitators accomplish this task, and the extent to which initiator mechanisms are conserved among different organisms have remained outstanding issues. Recent structural and biochemical findings have revealed that all cellular initiators, as well as the initiators of certain classes of double-stranded DNA viruses, possess a common adenine nucleotide-binding fold belonging to the ATPases Associated with various cellular Activities (AAA+) family. This review focuses on how the AAA+ domain has been recruited and adapted to control the initiation of DNA replication, and how the use of this ATPase module underlies a common set of initiator assembly states and functions. How biochemical and structural properties correlate with initiator activity, and how species-specific modifications give rise to unique initiator functions, are also discussed.

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Year:  2008        PMID: 18568846     DOI: 10.1080/10409230802058296

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  53 in total

Review 1.  Plant MCM proteins: role in DNA replication and beyond.

Authors:  Narendra Tuteja; Ngoc Quang Tran; Hung Quang Dang; Renu Tuteja
Journal:  Plant Mol Biol       Date:  2011-10-25       Impact factor: 4.076

2.  Structural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase α-primase.

Authors:  Bo Zhou; Diana R Arnett; Xian Yu; Aaron Brewster; Gregory A Sowd; Charlies L Xie; Stefan Vila; Dahai Gai; Ellen Fanning; Xiaojiang S Chen
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

3.  Structure of a DNA polymerase alpha-primase domain that docks on the SV40 helicase and activates the viral primosome.

Authors:  Hao Huang; Brian E Weiner; Haijiang Zhang; Brian E Fuller; Yue Gao; Brian M Wile; Kun Zhao; Diana R Arnett; Walter J Chazin; Ellen Fanning
Journal:  J Biol Chem       Date:  2010-03-16       Impact factor: 5.157

4.  Origin remodeling and opening in bacteria rely on distinct assembly states of the DnaA initiator.

Authors:  Karl E Duderstadt; Melissa L Mott; Nancy J Crisona; Kevin Chuang; Haw Yang; James M Berger
Journal:  J Biol Chem       Date:  2010-07-01       Impact factor: 5.157

Review 5.  Replication-fork dynamics.

Authors:  Karl E Duderstadt; Rodrigo Reyes-Lamothe; Antoine M van Oijen; David J Sherratt
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-01-01       Impact factor: 10.005

6.  Kinetic analysis of PCNA clamp binding and release in the clamp loading reaction catalyzed by Saccharomyces cerevisiae replication factor C.

Authors:  Melissa R Marzahn; Jaclyn N Hayner; Jennifer A Meyer; Linda B Bloom
Journal:  Biochim Biophys Acta       Date:  2014-10-23

7.  Differentiation of the DnaA-oriC subcomplex for DNA unwinding in a replication initiation complex.

Authors:  Shogo Ozaki; Yasunori Noguchi; Yasuhisa Hayashi; Erika Miyazaki; Tsutomu Katayama
Journal:  J Biol Chem       Date:  2012-08-31       Impact factor: 5.157

Review 8.  Structure and evolutionary origins of the CMG complex.

Authors:  Silvia Onesti; Stuart A MacNeill
Journal:  Chromosoma       Date:  2013-02-15       Impact factor: 4.316

Review 9.  Helicase loading at chromosomal origins of replication.

Authors:  Stephen P Bell; Jon M Kaguni
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-06-01       Impact factor: 10.005

10.  Recognition of the ring-opened state of proliferating cell nuclear antigen by replication factor C promotes eukaryotic clamp-loading.

Authors:  John A Tainer; J Andrew McCammon; Ivaylo Ivanov
Journal:  J Am Chem Soc       Date:  2010-06-02       Impact factor: 15.419

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