Literature DB >> 18565570

LogD: lipophilicity for ionisable compounds.

Melanie Kah1, Colin D Brown2.   

Abstract

The octanol/water partition coefficient (Kow) for organic compounds is widely used in predictive environmental studies. A significant proportion of contaminants of surface and ground water are ionisable (e.g. many pesticides, pharmaceuticals, metabolites). Such compounds may be partially ionised dependent on the pH. Since the neutral and ionic species exhibit different polarities, the Kow value of ionisable pesticides is pH dependent. It is therefore essential to determine Kow values over the full range of pH that occurs in the environment in order to get appropriate predictors. Numerous methods are available to measure lipophilicity but only a few are appropriate for ionisable pesticides (e.g. pH metric and filter probe methods). Parameters such as pH and ionic strength need to be carefully controlled when working with ionisable compounds. Variation of these factors probably explains why literature can yield Kow values that differ by more than one order of magnitude for some compounds. In this article, Kow values obtained for six acidic pesticides with three different methods are compared as well (data from the literature, measured by pH metric method and calculated with five computer programs). The values used in predictive regression equations needs to be either measured with a suitable method or selected from the literature with great care.

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Year:  2008        PMID: 18565570     DOI: 10.1016/j.chemosphere.2008.04.074

Source DB:  PubMed          Journal:  Chemosphere        ISSN: 0045-6535            Impact factor:   7.086


  23 in total

1.  Quantification of Lipophilicity of 1,2,4-Triazoles Using Micellar Chromatography.

Authors:  Małgorzata Janicka; Katarzyna Stępnik; Anna Pachuta-Stec
Journal:  Chromatographia       Date:  2012-04-08       Impact factor: 2.044

2.  Benchmark of different charges for prediction of the partitioning coefficient through the hydrophilic/lipophilic index.

Authors:  Oksana Fizer; Maksym Fizer; Vasyl Sidey; Yaroslav Studenyak; Ruslan Mariychuk
Journal:  J Mol Model       Date:  2018-05-31       Impact factor: 1.810

3.  Calculating distribution coefficients based on multi-scale free energy simulations: an evaluation of MM and QM/MM explicit solvent simulations of water-cyclohexane transfer in the SAMPL5 challenge.

Authors:  Gerhard König; Frank C Pickard; Jing Huang; Andrew C Simmonett; Florentina Tofoleanu; Juyong Lee; Pavlo O Dral; Samarjeet Prasad; Michael Jones; Yihan Shao; Walter Thiel; Bernard R Brooks
Journal:  J Comput Aided Mol Des       Date:  2016-08-30       Impact factor: 3.686

4.  Partition coefficients for the SAMPL5 challenge using transfer free energies.

Authors:  Michael R Jones; Bernard R Brooks; Angela K Wilson
Journal:  J Comput Aided Mol Des       Date:  2016-09-19       Impact factor: 3.686

5.  Lipophilicity screening of novel drug-like compounds and comparison to clog P.

Authors:  Dujuan Lu; Peter Chambers; Peter Wipf; Xiang-Qun Xie; Danielle Englert; Stephen Weber
Journal:  J Chromatogr A       Date:  2012-08-01       Impact factor: 4.759

6.  The mechanism of antimalarial action of [Au(CQ)(PPh(3))]PF(6): structural effects and increased drug lipophilicity enhance heme aggregation inhibition at lipid/water interfaces.

Authors:  Maribel Navarro; William Castro; Alberto Martínez; Roberto A Sánchez Delgado
Journal:  J Inorg Biochem       Date:  2010-11-13       Impact factor: 4.155

7.  Predicting the Drug Clearance Pathway with Structural Descriptors.

Authors:  Navid Kaboudi; Ali Shayanfar
Journal:  Eur J Drug Metab Pharmacokinet       Date:  2022-02-11       Impact factor: 2.441

8.  Effect of modulated alternating and direct current iontophoresis on transdermal delivery of lidocaine hydrochloride.

Authors:  Gaurav Bhatia; Ajay K Banga
Journal:  Biomed Res Int       Date:  2014-05-15       Impact factor: 3.411

9.  "CLipP"ing on lipids to generate antibacterial lipopeptides.

Authors:  Victor Yim; Iman Kavianinia; Melanie K Knottenbelt; Scott A Ferguson; Gregory M Cook; Simon Swift; Aparajita Chakraborty; Jane R Allison; Alan J Cameron; Paul W R Harris; Margaret A Brimble
Journal:  Chem Sci       Date:  2020-05-20       Impact factor: 9.825

10.  Amino acids change solute affinity for lipid bilayers.

Authors:  Katelyn M Duncan; William H Steel; Robert A Walker
Journal:  Biophys J       Date:  2021-07-24       Impact factor: 3.699

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