Literature DB >> 18563478

High diversity of diazotrophs in the forefield of a receding alpine glacier.

Laurence Duc1, Matthias Noll, Brigitte E Meier, Helmut Bürgmann, Josef Zeyer.   

Abstract

Forefields of receding glaciers are unique and sensitive environments representing natural chronosequences. In such habitats, microbial nitrogen fixation is of particular interest since the low concentration of bioavailable nitrogen is one of the key limitations for growth of plants and soil microorganisms. Asymbiotic nitrogen fixation in the Damma glacier (Swiss Central Alps) forefield soils was assessed using the acetylene reduction assay. Free-living diazotrophic diversity and population structure were resolved by assembling four NifH sequence libraries for bulk and rhizosphere soils at two soil age classes (8- and 70-year ice-free forefield). A total of 318 NifH sequences were analyzed and grouped into 45 unique phylotypes. Phylogenetic analyses revealed a higher diversity as well as a broader distribution of NifH sequences among phylogenetic clusters than formerly observed in other environments. This illustrates the importance of free-living diazotrophs and their potential contribution to the global nitrogen input in this nutrient-poor environment. NifH diversity in bulk soils was higher than in rhizosphere soils. Moreover, the four libraries displayed low similarity values. This indicated that both soil age and the presence of pioneer plants influence diversification and population structure of free-living diazotrophs.

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Year:  2008        PMID: 18563478     DOI: 10.1007/s00248-008-9408-5

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  41 in total

1.  New molecular screening tools for analysis of free-living diazotrophs in soil.

Authors:  Helmut Bürgmann; Franco Widmer; William Von Sigler; Josef Zeyer
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

Review 2.  Nitrogenase gene diversity and microbial community structure: a cross-system comparison.

Authors:  Jonathan P Zehr; Bethany D Jenkins; Steven M Short; Grieg F Steward
Journal:  Environ Microbiol       Date:  2003-07       Impact factor: 5.491

3.  Geobacter sulfurreducens can grow with oxygen as a terminal electron acceptor.

Authors:  W C Lin; M V Coppi; D R Lovley
Journal:  Appl Environ Microbiol       Date:  2004-04       Impact factor: 4.792

4.  ARB: a software environment for sequence data.

Authors:  Wolfgang Ludwig; Oliver Strunk; Ralf Westram; Lothar Richter; Harald Meier; Arno Buchner; Tina Lai; Susanne Steppi; Gangolf Jobb; Wolfram Förster; Igor Brettske; Stefan Gerber; Anton W Ginhart; Oliver Gross; Silke Grumann; Stefan Hermann; Ralf Jost; Andreas König; Thomas Liss; Ralph Lüssmann; Michael May; Björn Nonhoff; Boris Reichel; Robert Strehlow; Alexandros Stamatakis; Norbert Stuckmann; Alexander Vilbig; Michael Lenke; Thomas Ludwig; Arndt Bode; Karl-Heinz Schleifer
Journal:  Nucleic Acids Res       Date:  2004-02-25       Impact factor: 16.971

5.  Impacts of warming and fertilization on nitrogen-fixing microbial communities in the Canadian High Arctic.

Authors:  Julie R Deslippe; Keith N Egger; Greg H R Henry
Journal:  FEMS Microbiol Ecol       Date:  2005-01-12       Impact factor: 4.194

6.  Distribution of extensive nifH gene diversity across physical soil microenvironments.

Authors:  Javier A Izquierdo; Klaus Nüsslein
Journal:  Microb Ecol       Date:  2006-04-28       Impact factor: 4.552

7.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

8.  The nif gene operon of the methanogenic archaeon Methanococcus maripaludis.

Authors:  P S Kessler; C Blank; J A Leigh
Journal:  J Bacteriol       Date:  1998-03       Impact factor: 3.490

9.  Variation in microbial community composition and culturability in the rhizosphere of Leucanthemopsis alpina (L.) Heywood and adjacent bare soil along an alpine chronosequence.

Authors:  I P Edwards; H Bürgmann; C Miniaci; J Zeyer
Journal:  Microb Ecol       Date:  2006-08-15       Impact factor: 4.552

10.  Fermentation and Sulfur Reduction in the Mat-Building Cyanobacterium Microcoleus chthonoplastes.

Authors:  R Moezelaar; S M Bijvank; L J Stal
Journal:  Appl Environ Microbiol       Date:  1996-05       Impact factor: 4.792

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  26 in total

1.  Bacterial, archaeal and fungal succession in the forefield of a receding glacier.

Authors:  Anita Zumsteg; Jörg Luster; Hans Göransson; Rienk H Smittenberg; Ivano Brunner; Stefano M Bernasconi; Josef Zeyer; Beat Frey
Journal:  Microb Ecol       Date:  2011-12-13       Impact factor: 4.552

2.  Abundances and potential activities of nitrogen cycling microbial communities along a chronosequence of a glacier forefield.

Authors:  Robert Brankatschk; Stefanie Töwe; Kristina Kleineidam; Michael Schloter; Josef Zeyer
Journal:  ISME J       Date:  2010-12-02       Impact factor: 10.302

3.  Molecular Ecology of nifH Genes and Transcripts Along a Chronosequence in Revegetated Areas of the Tengger Desert.

Authors:  Jin Wang; Jing-Ting Bao; Xin-Rong Li; Yu-Bing Liu
Journal:  Microb Ecol       Date:  2015-08-16       Impact factor: 4.552

4.  Isolation and characterization of phosphate solubilizing bacteria from Western Indian Himalayan soils.

Authors:  Supriya Tomer; Deep Chandra Suyal; Anjana Shukla; Jyoti Rajwar; Amit Yadav; Yogesh Shouche; Reeta Goel
Journal:  3 Biotech       Date:  2017-05-29       Impact factor: 2.406

5.  Pioneer microbial communities of the Fimmvörðuháls lava flow, Eyjafjallajökull, Iceland.

Authors:  Laura C Kelly; Charles S Cockell; Thorsteinn Thorsteinsson; Viggó Marteinsson; John Stevenson
Journal:  Microb Ecol       Date:  2014-05-27       Impact factor: 4.552

6.  Nitrogen fertilization has a stronger effect on soil nitrogen-fixing bacterial communities than elevated atmospheric CO2.

Authors:  Sean T Berthrong; Chris M Yeager; Laverne Gallegos-Graves; Blaire Steven; Stephanie A Eichorst; Robert B Jackson; Cheryl R Kuske
Journal:  Appl Environ Microbiol       Date:  2014-03-07       Impact factor: 4.792

7.  A global synthesis of biodiversity responses to glacier retreat.

Authors:  Sophie Cauvy-Fraunié; Olivier Dangles
Journal:  Nat Ecol Evol       Date:  2019-11-18       Impact factor: 15.460

8.  Abundance of microbes involved in nitrogen transformation in the rhizosphere of Leucanthemopsis alpina (L.) Heywood grown in soils from different sites of the Damma glacier forefield.

Authors:  Stefanie Töwe; Andreas Albert; Kristina Kleineidam; Robert Brankatschk; Alexander Dümig; Gerhard Welzl; Jean Charles Munch; Josef Zeyer; Michael Schloter
Journal:  Microb Ecol       Date:  2010-06-12       Impact factor: 4.552

9.  N-fixing trees in wetland restoration plantings: effects on nitrogensupply and soil microbial communities.

Authors:  XuePing Chen; JunNa Yang; XiE Zhu; Xia Liang; YanRu Lei; ChiQuan He
Journal:  Environ Sci Pollut Res Int       Date:  2016-09-22       Impact factor: 4.223

10.  Diversity of endosymbiotic Nostoc in Gunnera magellanica from Tierra del Fuego, Chile [corrected].

Authors:  M A Fernández-Martínez; A de Los Ríos; L G Sancho; S Pérez-Ortega
Journal:  Microb Ecol       Date:  2013-04-23       Impact factor: 4.552

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