Literature DB >> 18563448

A genome-wide exploration suggests an oligogenic model of inheritance for the TAFI activity and its antigen levels.

Maria Sabater-Lleal1, Alfonso Buil, Juan Carlos Souto, Laura Alamsy, Montserrat Borrell, Mark Lathrop, John Blangero, Jordi Fontcuberta, José Manuel Soria.   

Abstract

Thrombin-Activatable Fibrinolysis Inhibitor (TAFI) is a protein that potently attenuates fibrinolysis. A considerable proportion of its variability levels is genetically determined. It has been associated with arterial and venous thrombosis. We conducted a Genome Wide Scan for genes affecting variation in plasma TAFI levels in 398 subjects from 21 extended Spanish families. The data were analyzed by a variance-component linkage method. A strong linkage signal was found on the long arm of Chromosome 13, near the DNA marker D13S156, where the structural gene encoding for TAFI is located. In addition, other new linkage signals were detected on chromosome regions 5p and 7q. More importantly, we performed another multipoint linkage analysis of functional TAFI conditioned on TAFI antigen levels. We detected a strong linkage signal on Chromosome 19 (LOD = 3.0, P = 0.0001) suggesting a novel QTL in this region involved in the specific functional activity of TAFI, regardless of the TAFI antigen levels. One notable aspect of this study is the identification of new QTLs that reveal a clearer picture of the genetic determinants responsible for variation in TAFI levels. Another is the replication of the linkage signal of the CPB2 gene, which confirms an important genetic determinant for TAFI antigen levels. These results strongly suggest an oligogenic mode of inheritance for TAFI, in which CPB2 gene accounts for a proportion of the variation of the phenotype together with other unknown genes that may represent potential risk factors for thrombotic disease.

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Year:  2008        PMID: 18563448      PMCID: PMC2592198          DOI: 10.1007/s00439-008-0527-3

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  37 in total

1.  Genetic determinants of hemostasis phenotypes in Spanish families.

Authors:  J C Souto; L Almasy; M Borrell; M Garí; E Martínez; J Mateo; W H Stone; J Blangero; J Fontcuberta
Journal:  Circulation       Date:  2000-04-04       Impact factor: 29.690

2.  Quantification of thrombin activatable fibrinolysis inhibitor (TAFI) gene polymorphism effects on plasma levels of TAFI measured with assays insensitive to isoform-dependent artefact.

Authors:  Corinne Frère; Pierre Emmanuel Morange; Noémie Saut; David Alexandre Tregouet; Mariana Grosley; Jérôme Beltran; Irène Juhan-Vague; Marie-Christine Alessi
Journal:  Thromb Haemost       Date:  2005-08       Impact factor: 5.249

3.  Genetic influence on thrombotic risk markers in the elderly--a Danish twin study.

Authors:  E M Bladbjerg; M P M de Maat; K Christensen; L Bathum; J Jespersen; J Hjelmborg
Journal:  J Thromb Haemost       Date:  2005-12-22       Impact factor: 5.824

4.  Thrombin activatable fibrinolysis inhibitor activation peptide shows association with all major subtypes of ischemic stroke and with TAFI gene variation.

Authors:  Claes Ladenvall; Ann Gils; Katarina Jood; Christian Blomstrand; Paul J Declerck; Christina Jern
Journal:  Arterioscler Thromb Vasc Biol       Date:  2007-02-01       Impact factor: 8.311

5.  Thrombin activatable fibrinolysis inhibitor and the risk for deep vein thrombosis.

Authors:  N H van Tilburg; F R Rosendaal; R M Bertina
Journal:  Blood       Date:  2000-05-01       Impact factor: 22.113

6.  Characterization of the gene encoding human TAFI (thrombin-activable fibrinolysis inhibitor; plasma procarboxypeptidase B).

Authors:  M B Boffa; T S Reid; E Joo; M E Nesheim; M L Koschinsky
Journal:  Biochemistry       Date:  1999-05-18       Impact factor: 3.162

7.  TAFI gene haplotypes, TAFI plasma levels and future risk of coronary heart disease: the PRIME Study.

Authors:  P E Morange; D A Tregouet; C Frere; G Luc; D Arveiler; J Ferrieres; P Amouyel; A Evans; P Ducimetiere; F Cambien; L Tiret; I Juhan-Vague
Journal:  J Thromb Haemost       Date:  2005-07       Impact factor: 5.824

8.  Genetic variation in thrombin-activatable fibrinolysis inhibitor (TAFI) is associated with the risk of splanchnic vein thrombosis.

Authors:  Emile L E de Bruijne; Sarwa Darwish Murad; Moniek P M de Maat; Michael W T Tanck; Elizabeth B Haagsma; Bart van Hoek; Frits R Rosendaal; Harry L A Janssen; Frank W G Leebeek
Journal:  Thromb Haemost       Date:  2007-02       Impact factor: 5.249

9.  Plasma TAFI levels influence the clot lysis time in healthy individuals in the presence of an intact intrinsic pathway of coagulation.

Authors:  L O Mosnier; P A von dem Borne; J C Meijers; B N Bouma
Journal:  Thromb Haemost       Date:  1998-11       Impact factor: 5.249

10.  Effect of single nucleotide polymorphisms on expression of the gene encoding thrombin-activatable fibrinolysis inhibitor: a functional analysis.

Authors:  Michael B Boffa; Deborah Maret; Jeffrey D Hamill; Nazareth Bastajian; Paul Crainich; Nancy S Jenny; Zhonghua Tang; Elizabeth M Macy; Russell P Tracy; Rendrik F Franco; Michael E Nesheim; Marlys L Koschinsky
Journal:  Blood       Date:  2007-09-12       Impact factor: 22.113

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  4 in total

1.  Genome association study of human chromosome 13 and susceptibility to coronary artery disease in a Chinese population.

Authors:  Peng Jie; Chen Xing; Li Tingting; Xie Yi; Zhang Jianning; Jiang Tingting; Liu Tianjiao; Chen Gang; Guo Yuan
Journal:  J Genet       Date:  2013-04       Impact factor: 1.166

2.  Genome scan of clot lysis time and its association with thrombosis in a protein C-deficient kindred.

Authors:  M E Meltzer; S J Hasstedt; C Y Vossen; P W Callas; Ph G DE Groot; F R Rosendaal; T Lisman; E G Bovill
Journal:  J Thromb Haemost       Date:  2011-07       Impact factor: 5.824

3.  A quantitative trait locus on chromosome 5p influences d-dimer levels in the san antonio family heart study.

Authors:  V P Diego; L Almasy; D L Rainwater; M C Mahaney; A G Comuzzie; S A Cole; R P Tracy; M P Stern; J W Maccluer; J Blangero
Journal:  Int J Vasc Med       Date:  2010-06-27

4.  A Genome-wide Study of Common and Rare Genetic Variants Associated with Circulating Thrombin Activatable Fibrinolysis Inhibitor.

Authors:  Tara M Stanne; Maja Olsson; Erik Lorentzen; Annie Pedersen; Anders Gummesson; Ann Gils; Katarina Jood; Gunnar Engström; Olle Melander; Paul J Declerck; Christina Jern
Journal:  Thromb Haemost       Date:  2018-01-29       Impact factor: 5.249

  4 in total

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