Literature DB >> 18555426

Investigation of bacterial growth on mixed substrates: experimental evaluation of cybernetic models.

D S Kompala1, D Ramkrishna, N B Jansen, G T Tsao.   

Abstract

Cybernetic models, developed earlier by the authors, have been evaluated experimentally for the growth of Klebsiella oxytoca in batch cultures using mixed substrates from glucose, xylose, arabinose, lactose, and fructose. Based entirely on information procured from batch growth on single substrates, the models accurately predict without further parameter fitting, diauxic growth on mixed substrates, automatically predicting the order in which the substrates are consumed. Even triauxic growth on a mixture of glucose, xylose, and lactose is predicted by the model based on single substrate data. Growth on glucose-fructose mixtures appears to need a slightly modified strategy for cybernetic variables.

Entities:  

Year:  1986        PMID: 18555426     DOI: 10.1002/bit.260280715

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  18 in total

1.  The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities.

Authors:  J S Edwards; B O Palsson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

Review 2.  Pseudomonad reverse carbon catabolite repression, interspecies metabolite exchange, and consortial division of labor.

Authors:  Heejoon Park; S Lee McGill; Adrienne D Arnold; Ross P Carlson
Journal:  Cell Mol Life Sci       Date:  2019-11-25       Impact factor: 9.261

Review 3.  Systems interface biology.

Authors:  Francis J Doyle; Jörg Stelling
Journal:  J R Soc Interface       Date:  2006-10-22       Impact factor: 4.118

Review 4.  Mathematical modelling of microbes: metabolism, gene expression and growth.

Authors:  Hidde de Jong; Stefano Casagranda; Nils Giordano; Eugenio Cinquemani; Delphine Ropers; Johannes Geiselmann; Jean-Luc Gouzé
Journal:  J R Soc Interface       Date:  2017-11       Impact factor: 4.118

Review 5.  Modeling of cell culture processes.

Authors:  E Tziampazis; A Sambanis
Journal:  Cytotechnology       Date:  1994       Impact factor: 2.058

6.  Phototrophic Lactate Utilization by Rhodopseudomonas palustris Is Stimulated by Coutilization with Additional Substrates.

Authors:  Alekhya Govindaraju; James B McKinlay; Breah LaSarre
Journal:  Appl Environ Microbiol       Date:  2019-05-16       Impact factor: 4.792

Review 7.  Bacterial growth: a statistical physicist's guide.

Authors:  Rosalind J Allen; Bartlomiej Waclaw
Journal:  Rep Prog Phys       Date:  2018-10-01

8.  A non-linear deterministic model for regulation of diauxic lag on cellobiose by the pneumococcal multidomain transcriptional regulator CelR.

Authors:  Alessandro Boianelli; Alessandro Bidossi; Luciana Gualdi; Laura Mulas; Chiara Mocenni; Gianni Pozzi; Antonio Vicino; Marco R Oggioni
Journal:  PLoS One       Date:  2012-10-22       Impact factor: 3.240

9.  In silico evolution of diauxic growth.

Authors:  Dominique F Chu
Journal:  BMC Evol Biol       Date:  2015-09-29       Impact factor: 3.260

10.  Which games are growing bacterial populations playing?

Authors:  Xiang-Yi Li; Cleo Pietschke; Sebastian Fraune; Philipp M Altrock; Thomas C G Bosch; Arne Traulsen
Journal:  J R Soc Interface       Date:  2015-07-06       Impact factor: 4.118

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