Literature DB >> 18553570

A cybernetic view of microbial growth: modeling of cells as optimal strategists.

P Dhurjati1, D Ramkrishna, M C Flickinger, G T Tsao.   

Abstract

A cybernetic framework is presented which views microbial response in multiple substrate environments as a judicious investment of cellular resources in synthesizing different key proteins according to an optimal regulatory strategy. A mathematical model is developed within the cybernetic framework for the diauxic growth of Klebsiella pneumoniae on a mixture of D-glucose and D-xylose. The "bang-bang" optimal policy describes well the experimental observations obtained using a fermenter coupled to an Apple II microcomputer. Striking variations in respiratory levels are observed experimentally during the switching of the cell's adaptive machinery for the utilization of the less preferred substrate.

Entities:  

Year:  1985        PMID: 18553570     DOI: 10.1002/bit.260270102

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  10 in total

1.  Modelling and parameter identification for batch fermentations with Streptomyces tendae under phosphate limitation.

Authors:  Claudia Mundry; Klaus-Peter Kuhn
Journal:  Appl Microbiol Biotechnol       Date:  1991-06       Impact factor: 4.813

Review 2.  Modeling of cell culture processes.

Authors:  E Tziampazis; A Sambanis
Journal:  Cytotechnology       Date:  1994       Impact factor: 2.058

Review 3.  The best models of metabolism.

Authors:  Eberhard O Voit
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2017-05-19

Review 4.  Molecular-level tradeoffs and metabolic adaptation to simultaneous stressors.

Authors:  Ross P Carlson; Reed L Taffs
Journal:  Curr Opin Biotechnol       Date:  2010-07-14       Impact factor: 9.740

5.  Modeling formalisms in Systems Biology.

Authors:  Daniel Machado; Rafael S Costa; Miguel Rocha; Eugénio C Ferreira; Bruce Tidor; Isabel Rocha
Journal:  AMB Express       Date:  2011-12-05       Impact factor: 3.298

Review 6.  Genome-based Modeling and Design of Metabolic Interactions in Microbial Communities.

Authors:  Radhakrishnan Mahadevan; Michael A Henson
Journal:  Comput Struct Biotechnol J       Date:  2012-11-12       Impact factor: 7.271

7.  Regulation-Structured Dynamic Metabolic Model Provides a Potential Mechanism for Delayed Enzyme Response in Denitrification Process.

Authors:  Hyun-Seob Song; Dennis G Thomas; James C Stegen; Minjing Li; Chongxuan Liu; Xuehang Song; Xingyuan Chen; Jim K Fredrickson; John M Zachara; Timothy D Scheibe
Journal:  Front Microbiol       Date:  2017-09-29       Impact factor: 5.640

Review 8.  Elucidation of complexity and prediction of interactions in microbial communities.

Authors:  Cristal Zuñiga; Livia Zaramela; Karsten Zengler
Journal:  Microb Biotechnol       Date:  2017-09-19       Impact factor: 5.813

9.  "Intelligent" descriptions of microbial kinetics in finitely dispersed bioreactors: neural and cybernetic models for PHB biosynthesis by Ralstonia eutropha.

Authors:  Pratap R Patnaik
Journal:  Microb Cell Fact       Date:  2007-08-08       Impact factor: 5.328

10.  Hierarchy of non-glucose sugars in Escherichia coli.

Authors:  Guy Aidelberg; Benjamin D Towbin; Daphna Rothschild; Erez Dekel; Anat Bren; Uri Alon
Journal:  BMC Syst Biol       Date:  2014-12-24
  10 in total

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