Literature DB >> 18548508

A searchable database of genetic evidence for psychiatric disorders.

Thomas Konneker1, Todd Barnes, Helena Furberg, Molly Losh, Cynthia M Bulik, Patrick F Sullivan.   

Abstract

This paper describes a new bioinformatic tool for use in psychiatric research, "SLEP" (Sullivan Lab Evidence Project). SLEP is a searchable archive of findings from psychiatric genetics that is freely available on the web for non-commercial use (http://slep.unc.edu). Via a simple interface, users can retrieve findings from genome-wide linkage, genome-wide association, and microarray studies for ADHD, autism, bipolar disorder, eating disorders, major depression, nicotine dependence, and schizophrenia. Findings can be save to disk or viewed via a genome browser. 2008 Wiley-Liss, Inc.

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Mesh：

Year:  2008        PMID： 18548508      PMCID： PMC2574546          DOI： 10.1002/ajmg.b.30802

Source DB:  PubMed          Journal:  Am J Med Genet B Neuropsychiatr Genet        ISSN： 1552-4841            Impact factor:   3.568


  16 in total

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2.  The UCSC Known Genes.

Authors:  Fan Hsu; W James Kent; Hiram Clawson; Robert M Kuhn; Mark Diekhans; David Haussler
Journal:  Bioinformatics       Date:  2006-02-24       Impact factor: 6.937

3.  Computational and experimental identification of novel human imprinted genes.

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Review 4.  Commentary: grading the credibility of molecular evidence for complex diseases.

Authors:  John P A Ioannidis
Journal:  Int J Epidemiol       Date:  2006-03-15       Impact factor: 7.196

5.  PLINK: a tool set for whole-genome association and population-based linkage analyses.

Authors:  Shaun Purcell; Benjamin Neale; Kathe Todd-Brown; Lori Thomas; Manuel A R Ferreira; David Bender; Julian Maller; Pamela Sklar; Paul I W de Bakker; Mark J Daly; Pak C Sham
Journal:  Am J Hum Genet       Date:  2007-07-25       Impact factor: 11.025

6.  TAMAL: an integrated approach to choosing SNPs for genetic studies of human complex traits.

Authors:  Bradley M Hemminger; Billy Saelim; Patrick F Sullivan
Journal:  Bioinformatics       Date:  2006-01-17       Impact factor: 6.937

7.  The UCSC Genome Browser Database: update 2006.

Authors:  A S Hinrichs; D Karolchik; R Baertsch; G P Barber; G Bejerano; H Clawson; M Diekhans; T S Furey; R A Harte; F Hsu; J Hillman-Jackson; R M Kuhn; J S Pedersen; A Pohl; B J Raney; K R Rosenbloom; A Siepel; K E Smith; C W Sugnet; A Sultan-Qurraie; D J Thomas; H Trumbower; R J Weber; M Weirauch; A S Zweig; D Haussler; W J Kent
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

8.  The HUGO Gene Nomenclature Database, 2006 updates.

Authors:  Tina A Eyre; Fabrice Ducluzeau; Tam P Sneddon; Sue Povey; Elspeth A Bruford; Michael J Lush
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9.  Database resources of the National Center for Biotechnology Information.

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Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

10.  Mendelian Inheritance in Man and its online version, OMIM.

Authors:  Victor A McKusick
Journal:  Am J Hum Genet       Date:  2007-03-08       Impact factor: 11.025
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Authors:  P F Sullivan
Journal:  Psychol Med       Date:  2008-06-04       Impact factor: 7.723

2.  Genome-wide association studies: a primer.

Authors:  A Corvin; N Craddock; P F Sullivan
Journal:  Psychol Med       Date:  2009-11-09       Impact factor: 7.723

3.  Meta-analysis of genome-wide association studies of attention-deficit/hyperactivity disorder.

Authors:  Benjamin M Neale; Sarah E Medland; Stephan Ripke; Philip Asherson; Barbara Franke; Klaus-Peter Lesch; Stephen V Faraone; Thuy Trang Nguyen; Helmut Schäfer; Peter Holmans; Mark Daly; Hans-Christoph Steinhausen; Christine Freitag; Andreas Reif; Tobias J Renner; Marcel Romanos; Jasmin Romanos; Susanne Walitza; Andreas Warnke; Jobst Meyer; Haukur Palmason; Jan Buitelaar; Alejandro Arias Vasquez; Nanda Lambregts-Rommelse; Michael Gill; Richard J L Anney; Kate Langely; Michael O'Donovan; Nigel Williams; Michael Owen; Anita Thapar; Lindsey Kent; Joseph Sergeant; Herbert Roeyers; Eric Mick; Joseph Biederman; Alysa Doyle; Susan Smalley; Sandra Loo; Hakon Hakonarson; Josephine Elia; Alexandre Todorov; Ana Miranda; Fernando Mulas; Richard P Ebstein; Aribert Rothenberger; Tobias Banaschewski; Robert D Oades; Edmund Sonuga-Barke; James McGough; Laura Nisenbaum; Frank Middleton; Xiaolan Hu; Stan Nelson
Journal:  J Am Acad Child Adolesc Psychiatry       Date:  2010-08-01       Impact factor: 8.829

Review 4.  Evolution in health and medicine Sackler colloquium: Comparative genomics of autism and schizophrenia.

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-01       Impact factor: 11.205

5.  Nicotine withdrawal sensitivity, linkage to chr6q26, and association of OPRM1 SNPs in the SMOking in FAMilies (SMOFAM) sample.

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Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2009-12       Impact factor: 4.254

6.  Genomic convergence of genome-wide investigations for complex traits.

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7.  Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs.

Authors:  D E Adkins; K Aberg; J L McClay; J Bukszár; Z Zhao; P Jia; T S Stroup; D Perkins; J P McEvoy; J A Lieberman; P F Sullivan; E J C G van den Oord
Journal:  Mol Psychiatry       Date:  2010-03-02       Impact factor: 15.992

8.  SZGR: a comprehensive schizophrenia gene resource.

Authors:  P Jia; J Sun; A Y Guo; Z Zhao
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9.  Strategies for the study of neuropsychiatric disorders using endophenotypes in developing countries: a potential databank from china.

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10.  Genome-wide association for major depressive disorder: a possible role for the presynaptic protein piccolo.

Authors:  P F Sullivan; E J C de Geus; G Willemsen; M R James; J H Smit; T Zandbelt; V Arolt; B T Baune; D Blackwood; S Cichon; W L Coventry; K Domschke; A Farmer; M Fava; S D Gordon; Q He; A C Heath; P Heutink; F Holsboer; W J Hoogendijk; J J Hottenga; Y Hu; M Kohli; D Lin; S Lucae; D J Macintyre; W Maier; K A McGhee; P McGuffin; G W Montgomery; W J Muir; W A Nolen; M M Nöthen; R H Perlis; K Pirlo; D Posthuma; M Rietschel; P Rizzu; A Schosser; A B Smit; J W Smoller; J-Y Tzeng; R van Dyck; M Verhage; F G Zitman; N G Martin; N R Wray; D I Boomsma; B W J H Penninx
Journal:  Mol Psychiatry       Date:  2008-12-09       Impact factor: 15.992
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