Literature DB >> 18546473

Statistical properties and information content of calcium oscillations.

Alexander Skupin1, Martin Falcke.   

Abstract

Calcium is the most important second messenger in living cells serving as a critical link between a large variety of extracellular stimuli and the intracellular target. Often, the Ca(2+) signal is carried by [Ca(2+)] oscillations. Our recent studies have demonstrated that in contrast to traditional ideas Ca(2+) oscillations do not occur by simple synchronization of channel clusters opening and closing in an oscillatory fashion but originate from microscopic fluctuation caused by the stochastic binding of the ligands Ca(2+) and IP(3) to the receptor's binding sites. They are orchestrated spatially on the cell level by wave nucleation. In this paper we analyze the stochastic data and show how internal properties can be determined from global observations. Further, we analyze the information content of spontaneous and stimulated oscillations.

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Year:  2007        PMID: 18546473

Source DB:  PubMed          Journal:  Genome Inform        ISSN: 0919-9454


  12 in total

1.  Timescales of IP(3)-evoked Ca(2+) spikes emerge from Ca(2+) puffs only at the cellular level.

Authors:  Kevin Thurley; Ian F Smith; Stephen C Tovey; Colin W Taylor; Ian Parker; Martin Falcke
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

2.  How does intracellular Ca2+ oscillate: by chance or by the clock?

Authors:  Alexander Skupin; Helmut Kettenmann; Ulrike Winkler; Maria Wartenberg; Heinrich Sauer; Stephen C Tovey; Colin W Taylor; Martin Falcke
Journal:  Biophys J       Date:  2007-12-07       Impact factor: 4.033

3.  Effectors of the frequency of calcium oscillations in HEK-293 cells: wavelet analysis and a computer model.

Authors:  David Szekely; Sarah C Brennan; Hee-Chang Mun; Arthur D Conigrave; Philip W Kuchel
Journal:  Eur Biophys J       Date:  2009-06-03       Impact factor: 1.733

4.  The interplay between plasma membrane and endoplasmic reticulum Ca(2+)ATPases in agonist-induced temporal Ca(2+) dynamics.

Authors:  Figen Amber Cicek; Ekin Ozge Ozgur; Erol Ozgur; Mehmet Ugur
Journal:  J Bioenerg Biomembr       Date:  2014-10-21       Impact factor: 2.945

5.  Simulation of spontaneous Ca2+ oscillations in astrocytes mediated by voltage-gated calcium channels.

Authors:  Shuai Zeng; Bing Li; Shaoqun Zeng; Shangbin Chen
Journal:  Biophys J       Date:  2009-11-04       Impact factor: 4.033

6.  Irregular Ca(2+) oscillations regulate transcription via cumulative spike duration and spike amplitude.

Authors:  Shanshan Song; Jiansha Li; Liping Zhu; Lei Cai; Qian Xu; Chen Ling; Yuan Su; Qinghua Hu
Journal:  J Biol Chem       Date:  2012-10-15       Impact factor: 5.157

7.  Derivation of Ca2+ signals from puff properties reveals that pathway function is robust against cell variability but sensitive for control.

Authors:  Kevin Thurley; Martin Falcke
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-20       Impact factor: 11.205

8.  Glutamate regulation of calcium and IP3 oscillating and pulsating dynamics in astrocytes.

Authors:  Maurizio De Pittà; Mati Goldberg; Vladislav Volman; Hugues Berry; Eshel Ben-Jacob
Journal:  J Biol Phys       Date:  2009-06-12       Impact factor: 1.365

9.  Observations of calcium dynamics in cortical secretory vesicles.

Authors:  Adi Raveh; Michael Valitsky; Liora Shani; Jens R Coorssen; Paul S Blank; Joshua Zimmerberg; Rami Rahamimoff
Journal:  Cell Calcium       Date:  2012-07-24       Impact factor: 6.817

10.  Modeling of the modulation by buffers of Ca2+ release through clusters of IP3 receptors.

Authors:  S Zeller; S Rüdiger; H Engel; J Sneyd; G Warnecke; I Parker; M Falcke
Journal:  Biophys J       Date:  2009-08-19       Impact factor: 4.033

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