Literature DB >> 18539749

Light-induced phosphorylation and degradation of the negative regulator PHYTOCHROME-INTERACTING FACTOR1 from Arabidopsis depend upon its direct physical interactions with photoactivated phytochromes.

Hui Shen1, Ling Zhu, Alicia Castillon, Manoj Majee, Bruce Downie, Enamul Huq.   

Abstract

The phytochrome (phy) family of photoreceptors regulates changes in gene expression in response to red/far-red light signals in part by physically interacting with constitutively nucleus-localized phy-interacting basic helix-loop-helix transcription factors (PIFs). Here, we show that PIF1, the member with the highest affinity for phys, is strongly sensitive to the quality and quantity of light. phyA plays a dominant role in regulating the degradation of PIF1 following initial light exposure, while phyB and phyD and possibly other phys also influence PIF1 degradation after prolonged illumination. PIF1 is rapidly phosphorylated and ubiquitinated under red and far-red light before being degraded with a half-life of approximately 1 to 2 min under red light. Although PIF1 interacts with phyB through a conserved active phyB binding motif, it interacts with phyA through a novel active phyA binding motif. phy interaction is necessary but not sufficient for the light-induced phosphorylation and degradation of PIF1. Domain-mapping studies reveal that the phy interaction, light-induced degradation, and transcriptional activation domains are located at the N-terminal 150-amino acid region of PIF1. Unlike PIF3, PIF1 does not interact with the two halves of either phyA or phyB separately. Moreover, overexpression of a light-stable truncated form of PIF1 causes constitutively photomorphogenic phenotypes in the dark. Taken together, these data suggest that removal of the negative regulators (e.g., PIFs) by light-induced proteolytic degradation might be sufficient to promote photomorphogenesis.

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Year:  2008        PMID: 18539749      PMCID: PMC2483374          DOI: 10.1105/tpc.108.060020

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  58 in total

1.  COP1, an Arabidopsis regulatory gene, encodes a protein with both a zinc-binding motif and a G beta homologous domain.

Authors:  X W Deng; M Matsui; N Wei; D Wagner; A M Chu; K A Feldmann; P H Quail
Journal:  Cell       Date:  1992-11-27       Impact factor: 41.582

2.  Functional characterization of phytochrome interacting factor 3 in phytochrome-mediated light signal transduction.

Authors:  Jonghyun Kim; Hankuil Yi; Goh Choi; Byongchul Shin; Pill-Soon Song; Giltsu Choi
Journal:  Plant Cell       Date:  2003-09-24       Impact factor: 11.277

Review 3.  Light signal transduction in higher plants.

Authors:  Meng Chen; Joanne Chory; Christian Fankhauser
Journal:  Annu Rev Genet       Date:  2004       Impact factor: 16.830

4.  Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation.

Authors:  Bassem Al-Sady; Weimin Ni; Stefan Kircher; Eberhard Schäfer; Peter H Quail
Journal:  Mol Cell       Date:  2006-08-04       Impact factor: 17.970

5.  PIF1 directly and indirectly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis.

Authors:  Jennifer Moon; Ling Zhu; Hui Shen; Enamul Huq
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-30       Impact factor: 11.205

6.  Phytochrome B binds with greater apparent affinity than phytochrome A to the basic helix-loop-helix factor PIF3 in a reaction requiring the PAS domain of PIF3.

Authors:  Y Zhu; J M Tepperman; C D Fairchild; P H Quail
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

7.  Phytochrome induces rapid PIF5 phosphorylation and degradation in response to red-light activation.

Authors:  Yu Shen; Rajnish Khanna; Christine M Carle; Peter H Quail
Journal:  Plant Physiol       Date:  2007-09-07       Impact factor: 8.340

8.  Coordinated regulation of Arabidopsis thaliana development by light and gibberellins.

Authors:  Suhua Feng; Cristina Martinez; Giuliana Gusmaroli; Yu Wang; Junli Zhou; Feng Wang; Liying Chen; Lu Yu; Juan M Iglesias-Pedraz; Stefan Kircher; Eberhard Schäfer; Xiangdong Fu; Liu-Min Fan; Xing Wang Deng
Journal:  Nature       Date:  2008-01-24       Impact factor: 49.962

9.  Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis.

Authors:  Diana Bauer; András Viczián; Stefan Kircher; Tabea Nobis; Roland Nitschke; Tim Kunkel; Kishore C S Panigrahi; Eva Adám; Erzsébet Fejes; Eberhard Schäfer; Ferenc Nagy
Journal:  Plant Cell       Date:  2004-05-21       Impact factor: 11.277

10.  Functional overlap of sequences that activate transcription and signal ubiquitin-mediated proteolysis.

Authors:  S E Salghetti; M Muratani; H Wijnen; B Futcher; W P Tansey
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

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  118 in total

1.  Direct regulation of phytoene synthase gene expression and carotenoid biosynthesis by phytochrome-interacting factors.

Authors:  Gabriela Toledo-Ortiz; Enamul Huq; Manuel Rodríguez-Concepción
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-07       Impact factor: 11.205

2.  Phytochrome-imposed oscillations in PIF3 protein abundance regulate hypocotyl growth under diurnal light/dark conditions in Arabidopsis.

Authors:  Judit Soy; Pablo Leivar; Nahuel González-Schain; Maria Sentandreu; Salomé Prat; Peter H Quail; Elena Monte
Journal:  Plant J       Date:  2012-06-11       Impact factor: 6.417

3.  Functional profiling identifies genes involved in organ-specific branches of the PIF3 regulatory network in Arabidopsis.

Authors:  Maria Sentandreu; Guiomar Martín; Nahuel González-Schain; Pablo Leivar; Judit Soy; James M Tepperman; Peter H Quail; Elena Monte
Journal:  Plant Cell       Date:  2011-11-22       Impact factor: 11.277

4.  Phytochrome signaling in green Arabidopsis seedlings: impact assessment of a mutually negative phyB-PIF feedback loop.

Authors:  Pablo Leivar; Elena Monte; Megan M Cohn; Peter H Quail
Journal:  Mol Plant       Date:  2012-04-05       Impact factor: 13.164

5.  Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis.

Authors:  Pablo Leivar; James M Tepperman; Megan M Cohn; Elena Monte; Bassem Al-Sady; Erika Erickson; Peter H Quail
Journal:  Plant Cell       Date:  2012-04-18       Impact factor: 11.277

Review 6.  Photobodies in light signaling.

Authors:  Elise K Van Buskirk; Peter V Decker; Meng Chen
Journal:  Plant Physiol       Date:  2011-09-27       Impact factor: 8.340

7.  Phytochrome signaling mechanisms.

Authors:  Jigang Li; Gang Li; Haiyang Wang; Xing Wang Deng
Journal:  Arabidopsis Book       Date:  2011-08-29

8.  A quartet of PIF bHLH factors provides a transcriptionally centered signaling hub that regulates seedling morphogenesis through differential expression-patterning of shared target genes in Arabidopsis.

Authors:  Yu Zhang; Oleg Mayba; Anne Pfeiffer; Hui Shi; James M Tepperman; Terence P Speed; Peter H Quail
Journal:  PLoS Genet       Date:  2013-01-31       Impact factor: 5.917

9.  PCH1 and PCHL Directly Interact with PIF1, Promote Its Degradation, and Inhibit Its Transcriptional Function during Photomorphogenesis.

Authors:  Mei-Chun Cheng; Beatrix Enderle; Praveen Kumar Kathare; Rafya Islam; Andreas Hiltbrunner; Enamul Huq
Journal:  Mol Plant       Date:  2020-02-13       Impact factor: 13.164

10.  Epidermal Phytochrome B Inhibits Hypocotyl Negative Gravitropism Non-Cell-Autonomously.

Authors:  Jaewook Kim; Kijong Song; Eunae Park; Keunhwa Kim; Gabyong Bae; Giltsu Choi
Journal:  Plant Cell       Date:  2016-10-06       Impact factor: 11.277

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