Literature DB >> 18535017

Pooled analysis of genetic variation at chromosome 8q24 and colorectal neoplasia risk.

Sonja I Berndt1, John D Potter, Aditi Hazra, Meredith Yeager, Gilles Thomas, Karen W Makar, Robert Welch, Amanda J Cross, Wen-Yi Huang, Robert E Schoen, Edward Giovannucci, Andrew T Chan, Stephen J Chanock, Ulrike Peters, David J Hunter, Richard B Hayes.   

Abstract

Several different genetic variants at chromosome 8q24 have been related to prostate, breast and colorectal cancer risk with evidence of region-specific risk differentials for various tumor types. We investigated the association between 15 polymorphisms located in 8q24 regions associated with cancer risk in a pooled analysis of 2587 colorectal adenoma cases, 547 colorectal cancer cases and 2798 controls of European descent from four studies. Logistic regression was used to estimate odds ratios (ORs) and 95% confidence intervals (95% CIs) for the associations. Three polymorphisms (rs10808555, rs6983267 and rs7837328) located between 128.47 and 128.54 Mb were found to be associated with colorectal tumor risk. The association was strongest for the previously reported rs6983267 variant and was similar for both adenoma (OR(per allele) = 1.16, 95% CI: 1.07-1.25, P = 0.0002) and cancer (OR (per allele) = 1.17, 95% CI: 1.01-1.35, P = 0.03). The strength of the association of the regional haplotype containing variant alleles at rs10808555, rs6983267 and rs7837328 but not rs10505476 was greater than that of any single variant of both adenoma (OR = 1.27, P = 0.0001) and cancer (OR = 1.26, P = 0.03). The risk associated with rs6983267 was stronger for multiple adenomas (OR(per allele) = 1.29, P = 5.6 x 10(-6)) than for single adenoma (OR(per allele) = 1.10, P = 0.03) with P(heterogeneity) = 0.008. This study confirms the association between colorectal neoplasia and the 8q24 polymorphisms located between 128.47 and 128.54 Mb and suggests a role for these variants in the formation of multiple adenomas.

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Year:  2008        PMID: 18535017      PMCID: PMC2561994          DOI: 10.1093/hmg/ddn166

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  34 in total

1.  A common variant associated with prostate cancer in European and African populations.

Authors:  Laufey T Amundadottir; Patrick Sulem; Julius Gudmundsson; Agnar Helgason; Adam Baker; Bjarni A Agnarsson; Asgeir Sigurdsson; Kristrun R Benediktsdottir; Jean-Baptiste Cazier; Jesus Sainz; Margret Jakobsdottir; Jelena Kostic; Droplaug N Magnusdottir; Shyamali Ghosh; Kari Agnarsson; Birgitta Birgisdottir; Louise Le Roux; Adalheidur Olafsdottir; Thorarinn Blondal; Margret Andresdottir; Olafia Svandis Gretarsdottir; Jon T Bergthorsson; Daniel Gudbjartsson; Arnaldur Gylfason; Gudmar Thorleifsson; Andrei Manolescu; Kristleifur Kristjansson; Gudmundur Geirsson; Helgi Isaksson; Julie Douglas; Jan-Erik Johansson; Katarina Bälter; Fredrik Wiklund; James E Montie; Xiaoying Yu; Brian K Suarez; Carole Ober; Kathleen A Cooney; Henrik Gronberg; William J Catalona; Gudmundur V Einarsson; Rosa B Barkardottir; Jeffrey R Gulcher; Augustine Kong; Unnur Thorsteinsdottir; Kari Stefansson
Journal:  Nat Genet       Date:  2006-05-07       Impact factor: 38.330

2.  Meta-analysis and pooled re-analysis of copy number changes in colorectal cancer detected by comparative genomic hybridization.

Authors:  Simon Hughes; Richard D Williams; Emily Webb; Richard S Houlston
Journal:  Anticancer Res       Date:  2006 Sep-Oct       Impact factor: 2.480

3.  Multiple regions within 8q24 independently affect risk for prostate cancer.

Authors:  Christopher A Haiman; Nick Patterson; Matthew L Freedman; Simon R Myers; Malcolm C Pike; Alicja Waliszewska; Julie Neubauer; Arti Tandon; Christine Schirmer; Gavin J McDonald; Steven C Greenway; Daniel O Stram; Loic Le Marchand; Laurence N Kolonel; Melissa Frasco; David Wong; Loreall C Pooler; Kristin Ardlie; Ingrid Oakley-Girvan; Alice S Whittemore; Kathleen A Cooney; Esther M John; Sue A Ingles; David Altshuler; Brian E Henderson; David Reich
Journal:  Nat Genet       Date:  2007-04-01       Impact factor: 38.330

4.  Stem cell regulatory function mediated by expression of a novel mouse Oct4 pseudogene.

Authors:  Huey Lin; Arsalan Shabbir; Merced Molnar; Techung Lee
Journal:  Biochem Biophys Res Commun       Date:  2007-01-29       Impact factor: 3.575

5.  Conserved POU-binding site linked to SP1-binding site within FZD5 promoter: Transcriptional mechanisms of FZD5 in undifferentiated human ES cells, fetal liver/spleen, adult colon, pancreatic islet, and diffuse-type gastric cancer.

Authors:  Yuriko Katoh; Masaru Katoh
Journal:  Int J Oncol       Date:  2007-03       Impact factor: 5.650

6.  Yield of advanced adenoma and cancer based on polyp size detected at screening flexible sigmoidoscopy.

Authors:  Robert E Schoen; Joel L Weissfeld; Paul F Pinsky; Thomas Riley
Journal:  Gastroenterology       Date:  2006-08-14       Impact factor: 22.682

7.  Genome-wide association study identifies a second prostate cancer susceptibility variant at 8q24.

Authors:  Julius Gudmundsson; Patrick Sulem; Andrei Manolescu; Laufey T Amundadottir; Daniel Gudbjartsson; Agnar Helgason; Thorunn Rafnar; Jon T Bergthorsson; Bjarni A Agnarsson; Adam Baker; Asgeir Sigurdsson; Kristrun R Benediktsdottir; Margret Jakobsdottir; Jianfeng Xu; Thorarinn Blondal; Jelena Kostic; Jielin Sun; Shyamali Ghosh; Simon N Stacey; Magali Mouy; Jona Saemundsdottir; Valgerdur M Backman; Kristleifur Kristjansson; Alejandro Tres; Alan W Partin; Marjo T Albers-Akkers; Javier Godino-Ivan Marcos; Patrick C Walsh; Dorine W Swinkels; Sebastian Navarrete; Sarah D Isaacs; Katja K Aben; Theresa Graif; John Cashy; Manuel Ruiz-Echarri; Kathleen E Wiley; Brian K Suarez; J Alfred Witjes; Mike Frigge; Carole Ober; Eirikur Jonsson; Gudmundur V Einarsson; Jose I Mayordomo; Lambertus A Kiemeney; William B Isaacs; William J Catalona; Rosa B Barkardottir; Jeffrey R Gulcher; Unnur Thorsteinsdottir; Augustine Kong; Kari Stefansson
Journal:  Nat Genet       Date:  2007-04-01       Impact factor: 38.330

8.  Genome-wide association study of prostate cancer identifies a second risk locus at 8q24.

Authors:  Meredith Yeager; Nick Orr; Richard B Hayes; Kevin B Jacobs; Peter Kraft; Sholom Wacholder; Mark J Minichiello; Paul Fearnhead; Kai Yu; Nilanjan Chatterjee; Zhaoming Wang; Robert Welch; Brian J Staats; Eugenia E Calle; Heather Spencer Feigelson; Michael J Thun; Carmen Rodriguez; Demetrius Albanes; Jarmo Virtamo; Stephanie Weinstein; Fredrick R Schumacher; Edward Giovannucci; Walter C Willett; Geraldine Cancel-Tassin; Olivier Cussenot; Antoine Valeri; Gerald L Andriole; Edward P Gelmann; Margaret Tucker; Daniela S Gerhard; Joseph F Fraumeni; Robert Hoover; David J Hunter; Stephen J Chanock; Gilles Thomas
Journal:  Nat Genet       Date:  2007-04-01       Impact factor: 38.330

Review 9.  Relative and absolute risk of colorectal cancer for individuals with a family history: a meta-analysis.

Authors:  Adam S Butterworth; Julian P T Higgins; Paul Pharoah
Journal:  Eur J Cancer       Date:  2005-12-09       Impact factor: 9.162

10.  Oct4 targets regulatory nodes to modulate stem cell function.

Authors:  Pearl A Campbell; Carolina Perez-Iratxeta; Miguel A Andrade-Navarro; Michael A Rudnicki
Journal:  PLoS One       Date:  2007-06-20       Impact factor: 3.240

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  43 in total

1.  Genetic variation at chromosome 8q24 in osteosarcoma cases and controls.

Authors:  Lisa Mirabello; Sonja I Berndt; Guillermo F Seratti; Laurie Burdett; Meredith Yeager; Salma Chowdhury; Kedest Teshome; Arinze Uzoka; Chester Douglass; Richard B Hayes; Robert N Hoover; Sharon A Savage
Journal:  Carcinogenesis       Date:  2010-06-07       Impact factor: 4.944

2.  Generalizability and epidemiologic characterization of eleven colorectal cancer GWAS hits in multiple populations.

Authors:  Jing He; Lynne R Wilkens; Daniel O Stram; Laurence N Kolonel; Brian E Henderson; Anna H Wu; Loic Le Marchand; Christopher A Haiman
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-11-11       Impact factor: 4.254

3.  Characterization of 9p24 risk locus and colorectal adenoma and cancer: gene-environment interaction and meta-analysis.

Authors:  Jonathan D Kocarnik; Carolyn M Hutter; Martha L Slattery; Sonja I Berndt; Li Hsu; David J Duggan; Jill Muehling; Bette J Caan; Shirley A A Beresford; Aleksandar Rajkovic; Gloria E Sarto; James R Marshall; Nazik Hammad; Robert B Wallace; Karen W Makar; Ross L Prentice; John D Potter; Richard B Hayes; Ulrike Peters
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-10-26       Impact factor: 4.254

4.  The common colorectal cancer predisposition SNP rs6983267 at chromosome 8q24 confers potential to enhanced Wnt signaling.

Authors:  Sari Tuupanen; Mikko Turunen; Rainer Lehtonen; Outi Hallikas; Sakari Vanharanta; Teemu Kivioja; Mikael Björklund; Gonghong Wei; Jian Yan; Iina Niittymäki; Jukka-Pekka Mecklin; Heikki Järvinen; Ari Ristimäki; Mariachiara Di-Bernardo; Phil East; Luis Carvajal-Carmona; Richard S Houlston; Ian Tomlinson; Kimmo Palin; Esko Ukkonen; Auli Karhu; Jussi Taipale; Lauri A Aaltonen
Journal:  Nat Genet       Date:  2009-06-28       Impact factor: 38.330

5.  Association between polymorphism rs6983267 and gastric cancer risk in Chinese population.

Authors:  Yi Guo; Jing Fang; Yan Liu; Hai-Hui Sheng; Xiao-Yan Zhang; Hai-Na Chai; Wei Jin; Ke-Hao Zhang; Chang-Qing Yang; Heng-Jun Gao
Journal:  World J Gastroenterol       Date:  2011-04-07       Impact factor: 5.742

6.  Characterization of gene-environment interactions for colorectal cancer susceptibility loci.

Authors:  Carolyn M Hutter; Jenny Chang-Claude; Martha L Slattery; Bethann M Pflugeisen; Yi Lin; David Duggan; Hongmei Nan; Mathieu Lemire; Jagadish Rangrej; Jane C Figueiredo; Shuo Jiao; Tabitha A Harrison; Yan Liu; Lin S Chen; Deanna L Stelling; Greg S Warnick; Michael Hoffmeister; Sébastien Küry; Charles S Fuchs; Edward Giovannucci; Aditi Hazra; Peter Kraft; David J Hunter; Steven Gallinger; Brent W Zanke; Hermann Brenner; Bernd Frank; Jing Ma; Cornelia M Ulrich; Emily White; Polly A Newcomb; Charles Kooperberg; Andrea Z LaCroix; Ross L Prentice; Rebecca D Jackson; Robert E Schoen; Stephen J Chanock; Sonja I Berndt; Richard B Hayes; Bette J Caan; John D Potter; Li Hsu; Stéphane Bézieau; Andrew T Chan; Thomas J Hudson; Ulrike Peters
Journal:  Cancer Res       Date:  2012-02-24       Impact factor: 12.701

7.  Effect of rs6983267 polymorphism in the 8q24 region and rs4444903 polymorphism in EGF gene on the risk of sporadic colorectal cancer in Iranian population.

Authors:  A Daraei; R Salehi; M Salehi; M H Emami; M Janghorbani; M Jonghorbani; F Mohamadhashem; H Tavakoli
Journal:  Med Oncol       Date:  2011-05-13       Impact factor: 3.064

8.  Associations between variants of the 8q24 chromosome and nine smoking-related cancer sites.

Authors:  Sungshim Lani Park; Shen-Chih Chang; Lin Cai; Carlos Cordon-Cardo; Bao-Guo Ding; Sander Greenland; Shehnaz K Hussain; Qingwu Jiang; Simin Liu; Ming-Lan Lu; Jenny T Mao; Hal Morgenstern; Li-Na Mu; Leslie J Ng; Allan Pantuck; Jianyu Rao; Victor E Reuter; Donald P Tashkin; Nai-Chieh Y You; Can-Qing Yu; Shun-Zhang Yu; Jin-Kou Zhao; Arie Belldegrun; Zuo-Feng Zhang
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2008-11       Impact factor: 4.254

9.  Association studies on 11 published colorectal cancer risk loci.

Authors:  S von Holst; S Picelli; D Edler; C Lenander; J Dalén; F Hjern; N Lundqvist; U Lindforss; L Påhlman; K Smedh; A Törnqvist; J Holm; M Janson; M Andersson; S Ekelund; L Olsson; S Ghazi; N Papadogiannakis; A Tenesa; S M Farrington; H Campbell; M G Dunlop; A Lindblom
Journal:  Br J Cancer       Date:  2010-07-20       Impact factor: 7.640

10.  Association between an 8q24 locus and the risk of colorectal cancer in Japanese.

Authors:  Keitaro Matsuo; Takeshi Suzuki; Hidemi Ito; Satoyo Hosono; Takakazu Kawase; Miki Watanabe; Kohei Shitara; Koji Komori; Yukihide Kanemitsu; Takashi Hirai; Yasushi Yatabe; Hideo Tanaka; Kazuo Tajima
Journal:  BMC Cancer       Date:  2009-10-26       Impact factor: 4.430

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