Literature DB >> 18532797

Mode excitation Monte Carlo simulations of mesoscopically large membranes.

Oded Farago1.   

Abstract

Solvent-free coarse grained models represent one of the most promising approaches for molecular simulations of mesoscopically large membranes. In these models, the size of the simulated membrane is limited by the slow relaxation time of the longest bending mode. Here, we present a Monte Carlo algorithm with update moves in which all the lipids are simultaneously displaced. These collective moves result in fast excitation and relaxation of the long wavelength thermal fluctuations. We apply the method to simulations of a bilayer membrane with linear size of approximately 50 nm and show reduction in the relaxation time by two orders of magnitudes when compared to conventional Monte Carlo.

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Year:  2008        PMID: 18532797     DOI: 10.1063/1.2918736

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  An implicit solvent coarse-grained lipid model with correct stress profile.

Authors:  Alex J Sodt; Teresa Head-Gordon
Journal:  J Chem Phys       Date:  2010-05-28       Impact factor: 3.488

2.  Elasticity and mechanical instability of charged lipid bilayers in ionic solutions.

Authors:  Yotam Y Avital; Niels Grønbech-Jensen; Oded Farago
Journal:  Eur Phys J E Soft Matter       Date:  2014-08-15       Impact factor: 1.890

  2 in total

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