Literature DB >> 18524529

Variational multiple-tensor fitting of fiber-ambiguous diffusion-weighted magnetic resonance imaging voxels.

Ofer Pasternak1, Yaniv Assaf, Nathan Intrator, Nir Sochen.   

Abstract

Partial volume effects are often experienced in diffusion-weighted MRI of biologic tissue. This is when the signal attenuation reflects a mixture of diffusion processes, originating from different tissue compartments, residing in the same voxel. Decomposing the mixture requires elaborated models that account for multiple compartments, yet the fitting problem for those models is usually ill posed. We suggest a novel approach for stabilizing the fitting problem of the multiple-tensors model by a variational framework that adds biologically oriented assumption of neighborhood alignments. The framework is designed to address fiber ambiguity caused by a number of neuronal fiber compartments residing in the same voxel. The method requires diffusion data acquired by common, clinically feasible MRI sequences, and is able to derive familiar tensor quantities for each compartment. Neighborhood alignment is performed by adding piece-wise smooth regularization constraints to an energy function. Minimization with the gradient descent method produces a set of diffusion-reaction partial differential equations that describe a tensor-preserving flow towards a best approximation of the data while maintaining the constraints. We analyze fiber compartment separation capabilities on a synthetic model of crossing fibers and on brain areas known to have crossing fibers. We compare the results with diffusion tensor imaging analysis and discuss applications for the framework.

Mesh:

Year:  2008        PMID: 18524529     DOI: 10.1016/j.mri.2008.01.006

Source DB:  PubMed          Journal:  Magn Reson Imaging        ISSN: 0730-725X            Impact factor:   2.546


  16 in total

1.  Multi-diffusion-tensor fitting via spherical deconvolution: a unifying framework.

Authors:  Thomas Schultz; Carl-Fredrik Westin; Gordon Kindlmann
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

Review 2.  On high b diffusion imaging in the human brain: ruminations and experimental insights.

Authors:  Robert V Mulkern; Steven J Haker; Stephan E Maier
Journal:  Magn Reson Imaging       Date:  2009-06-10       Impact factor: 2.546

3.  Improvement of partial volume segmentation for brain tissue on diffusion tensor images using multiple-tensor estimation.

Authors:  Seiji Kumazawa; Takashi Yoshiura; Hiroshi Honda; Fukai Toyofuku
Journal:  J Digit Imaging       Date:  2013-12       Impact factor: 4.056

Review 4.  A review of magnetic resonance imaging and diffusion tensor imaging findings in mild traumatic brain injury.

Authors:  M E Shenton; H M Hamoda; J S Schneiderman; S Bouix; O Pasternak; Y Rathi; M-A Vu; M P Purohit; K Helmer; I Koerte; A P Lin; C-F Westin; R Kikinis; M Kubicki; R A Stern; R Zafonte
Journal:  Brain Imaging Behav       Date:  2012-06       Impact factor: 3.978

5.  Fast and accurate initialization of the free-water imaging model parameters from multi-shell diffusion MRI.

Authors:  Ørjan Bergmann; Rafael Henriques; Carl-Fredrik Westin; Ofer Pasternak
Journal:  NMR Biomed       Date:  2019-12-19       Impact factor: 4.044

6.  Separating blood and water: Perfusion and free water elimination from diffusion MRI in the human brain.

Authors:  Anna S Rydhög; Filip Szczepankiewicz; Ronnie Wirestam; André Ahlgren; Carl-Fredrik Westin; Linda Knutsson; Ofer Pasternak
Journal:  Neuroimage       Date:  2017-04-13       Impact factor: 6.556

7.  Linear transforms for Fourier data on the sphere: application to high angular resolution diffusion MRI of the brain.

Authors:  Justin P Haldar; Richard M Leahy
Journal:  Neuroimage       Date:  2013-01-24       Impact factor: 6.556

8.  Dictionary-based fiber orientation estimation with improved spatial consistency.

Authors:  Chuyang Ye; Jerry L Prince
Journal:  Med Image Anal       Date:  2017-11-23       Impact factor: 8.545

9.  Evaluation of white matter myelin water fraction in chronic stroke.

Authors:  M R Borich; A L Mackay; I M Vavasour; A Rauscher; L A Boyd
Journal:  Neuroimage Clin       Date:  2013-04-21       Impact factor: 4.881

10.  Parametric representation of multiple white matter fascicles from cube and sphere diffusion MRI.

Authors:  Benoit Scherrer; Simon K Warfield
Journal:  PLoS One       Date:  2012-11-26       Impact factor: 3.240

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