Literature DB >> 18523443

Genome size diversity in the family Drosophilidae.

T R Gregory1, J S Johnston.   

Abstract

Flies in the genus Drosophila have been the dominant model organisms in genetics for over a century and, with a dozen complete sequences now available, continue as such in modern comparative genomics. Surprisingly, estimates of genome size for this genus have been relatively sparse, covering less than 2% of species. Here, best practice flow cytometric genome size estimates are reported for both male and female flies from 67 species from six genera in the family Drosophilidae, including 55 species from the genus Drosophila. Direct and phylogenetically corrected correlation analyses indicate that genome size is positively correlated with temperature-controlled duration of development in Drosophila, and there is indication that genome size may be positively related to body size and sperm length in this genus. These findings may provide some explanation for the streamlined genomes found in these insects, and complement recent work demonstrating possible selective constraints on further deletion of noncoding DNA.

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Year:  2008        PMID: 18523443     DOI: 10.1038/hdy.2008.49

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  51 in total

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Authors:  France Dufresne; Nicholas Jeffery
Journal:  Chromosome Res       Date:  2011-10       Impact factor: 5.239

2.  Mining the plant-herbivore interface with a leafmining Drosophila of Arabidopsis.

Authors:  Noah K Whiteman; Simon C Groen; Daniela Chevasco; Ashley Bear; Noor Beckwith; T Ryan Gregory; Carine Denoux; Nicole Mammarella; Frederick M Ausubel; Naomi E Pierce
Journal:  Mol Ecol       Date:  2010-11-13       Impact factor: 6.185

3.  Extremely small genomes in two unrelated dipteran insects with shared early developmental traits.

Authors:  Urs Schmidt-Ott; Ab Matteen Rafiqi; Klaus Sander; J Spencer Johnston
Journal:  Dev Genes Evol       Date:  2009-03-24       Impact factor: 0.900

4.  The 19 genomes of Drosophila: a BAC library resource for genus-wide and genome-scale comparative evolutionary research.

Authors:  Xiang Song; Jose Luis Goicoechea; Jetty S S Ammiraju; Meizhong Luo; Ruifeng He; Jinke Lin; So-Jeong Lee; Nicholas Sisneros; Tom Watts; David A Kudrna; Wolfgang Golser; Elizabeth Ashley; Kristi Collura; Michele Braidotti; Yeisoo Yu; Luciano M Matzkin; Bryant F McAllister; Therese Ann Markow; Rod A Wing
Journal:  Genetics       Date:  2011-02-14       Impact factor: 4.562

5.  New genome size estimates of 134 species of arthropods.

Authors:  Shawn Jason Hanrahan; J Spencer Johnston
Journal:  Chromosome Res       Date:  2011-08       Impact factor: 5.239

6.  Karyotype analysis of the Russian wheat aphid, Diuraphis noxia (Kurdjumov) (Hemiptera: Aphididae) reveals a large X chromosome with rRNA and histone gene families.

Authors:  Jana Novotná; Jan Havelka; Petr Starý; Petr Koutecký; Magda Vítková
Journal:  Genetica       Date:  2011-02-19       Impact factor: 1.082

Review 7.  Helitrons shaping the genomic architecture of Drosophila: enrichment of DINE-TR1 in α- and β-heterochromatin, satellite DNA emergence, and piRNA expression.

Authors:  Guilherme B Dias; Pedro Heringer; Marta Svartman; Gustavo C S Kuhn
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

8.  Hawaiian Drosophila genomes: size variation and evolutionary expansions.

Authors:  Elysse M Craddock; Joseph G Gall; Mark Jonas
Journal:  Genetica       Date:  2016-01-20       Impact factor: 1.082

9.  Evolutionary Dynamics of Abundant 7-bp Satellites in the Genome of Drosophila virilis.

Authors:  Jullien M Flynn; Manyuan Long; Rod A Wing; Andrew G Clark
Journal:  Mol Biol Evol       Date:  2020-05-01       Impact factor: 16.240

10.  Genome size correlates with reproductive fitness in seed beetles.

Authors:  Göran Arnqvist; Ahmed Sayadi; Elina Immonen; Cosima Hotzy; Daniel Rankin; Midori Tuda; Carl E Hjelmen; J Spencer Johnston
Journal:  Proc Biol Sci       Date:  2015-09-22       Impact factor: 5.349

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