Literature DB >> 18521666

The Collaborative Cross, developing a resource for mammalian systems genetics: a status report of the Wellcome Trust cohort.

Fuad A Iraqi1, Gary Churchill, Richard Mott.   

Abstract

We report on the progress of a project funded by the Wellcome Trust to produce over 100 recombinant inbred mouse lines as part of the Collaborative Cross (CC) genetic reference panel. These new strains of mice are being derived from a set of eight genetically diverse founders. The genomes of the finished strains will be mosaics of the founder strains' genomes with a high density of independent recombination breakpoints. The CC mice will be available for distribution free of any intellectual property constraints to serve as a community resource for systems genetics studies.

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Year:  2008        PMID： 18521666     DOI： 10.1007/s00335-008-9113-1

Source DB:  PubMed          Journal:  Mamm Genome        ISSN： 0938-8990            Impact factor:   2.957


  6 in total

1.  Genetical genomics: the added value from segregation.

Authors:  R C Jansen; J P Nap
Journal:  Trends Genet       Date:  2001-07       Impact factor: 11.639

Review 2.  Genetic dissection of complex and quantitative traits: from fantasy to reality via a community effort.

Authors:  David W Threadgill; Kent W Hunter; Robert W Williams
Journal:  Mamm Genome       Date:  2002-04       Impact factor: 2.957

3.  The genomes of recombinant inbred lines.

Authors:  Karl W Broman
Journal:  Genetics       Date:  2004-11-15       Impact factor: 4.562

4.  The Collaborative Cross, a community resource for the genetic analysis of complex traits.

Authors:  Gary A Churchill; David C Airey; Hooman Allayee; Joe M Angel; Alan D Attie; Jackson Beatty; William D Beavis; John K Belknap; Beth Bennett; Wade Berrettini; Andre Bleich; Molly Bogue; Karl W Broman; Kari J Buck; Ed Buckler; Margit Burmeister; Elissa J Chesler; James M Cheverud; Steven Clapcote; Melloni N Cook; Roger D Cox; John C Crabbe; Wim E Crusio; Ariel Darvasi; Christian F Deschepper; R W Doerge; Charles R Farber; Jiri Forejt; Daniel Gaile; Steven J Garlow; Hartmut Geiger; Howard Gershenfeld; Terry Gordon; Jing Gu; Weikuan Gu; Gerald de Haan; Nancy L Hayes; Craig Heller; Heinz Himmelbauer; Robert Hitzemann; Kent Hunter; Hui-Chen Hsu; Fuad A Iraqi; Boris Ivandic; Howard J Jacob; Ritsert C Jansen; Karl J Jepsen; Dabney K Johnson; Thomas E Johnson; Gerd Kempermann; Christina Kendziorski; Malak Kotb; R Frank Kooy; Bastien Llamas; Frank Lammert; Jean-Michel Lassalle; Pedro R Lowenstein; Lu Lu; Aldons Lusis; Kenneth F Manly; Ralph Marcucio; Doug Matthews; Juan F Medrano; Darla R Miller; Guy Mittleman; Beverly A Mock; Jeffrey S Mogil; Xavier Montagutelli; Grant Morahan; David G Morris; Richard Mott; Joseph H Nadeau; Hiroki Nagase; Richard S Nowakowski; Bruce F O'Hara; Alexander V Osadchuk; Grier P Page; Beverly Paigen; Kenneth Paigen; Abraham A Palmer; Huei-Ju Pan; Leena Peltonen-Palotie; Jeremy Peirce; Daniel Pomp; Michal Pravenec; Daniel R Prows; Zhonghua Qi; Roger H Reeves; John Roder; Glenn D Rosen; Eric E Schadt; Leonard C Schalkwyk; Ze'ev Seltzer; Kazuhiro Shimomura; Siming Shou; Mikko J Sillanpää; Linda D Siracusa; Hans-Willem Snoeck; Jimmy L Spearow; Karen Svenson; Lisa M Tarantino; David Threadgill; Linda A Toth; William Valdar; Fernando Pardo-Manuel de Villena; Craig Warden; Steve Whatley; Robert W Williams; Tim Wiltshire; Nengjun Yi; Dabao Zhang; Min Zhang; Fei Zou
Journal:  Nat Genet       Date:  2004-11       Impact factor: 38.330

5.  Simulating the collaborative cross: power of quantitative trait loci detection and mapping resolution in large sets of recombinant inbred strains of mice.

Authors:  William Valdar; Jonathan Flint; Richard Mott
Journal:  Genetics       Date:  2005-12-15       Impact factor: 4.562

6.  The polymorphism architecture of mouse genetic resources elucidated using genome-wide resequencing data: implications for QTL discovery and systems genetics.

Authors:  Adam Roberts; Fernando Pardo-Manuel de Villena; Wei Wang; Leonard McMillan; David W Threadgill
Journal:  Mamm Genome       Date:  2007-08-03       Impact factor: 2.957
  6 in total
  70 in total

Review 1.  Designing phenotyping studies for genetically engineered mice.

Authors:  C J Zeiss; J M Ward; H G Allore
Journal:  Vet Pathol       Date:  2011-09-19       Impact factor: 2.221

2.  Ten years of the Collaborative Cross.

Authors:  David W Threadgill; Gary A Churchill
Journal:  Genetics       Date:  2012-02       Impact factor: 4.562

3.  1,3-Butadiene-induced mitochondrial dysfunction is correlated with mitochondrial CYP2E1 activity in Collaborative Cross mice.

Authors:  Jessica H Hartman; Grover P Miller; Andres A Caro; Stephanie D Byrum; Lisa M Orr; Samuel G Mackintosh; Alan J Tackett; Lee Ann MacMillan-Crow; Lance M Hallberg; Bill T Ameredes; Gunnar Boysen
Journal:  Toxicology       Date:  2017-01-09       Impact factor: 4.221

Review 4.  High-Diversity Mouse Populations for Complex Traits.

Authors:  Michael C Saul; Vivek M Philip; Laura G Reinholdt; Elissa J Chesler
Journal:  Trends Genet       Date:  2019-05-24       Impact factor: 11.639

5.  Genotype is a stronger determinant than sex of the mouse gut microbiota.

Authors:  Amir Kovacs; Noa Ben-Jacob; Hanna Tayem; Eran Halperin; Fuad A Iraqi; Uri Gophna
Journal:  Microb Ecol       Date:  2010-12-23       Impact factor: 4.552

6.  Genetic dissection of a key reproductive barrier between nascent species of house mice.

Authors:  Michael A White; Brian Steffy; Tim Wiltshire; Bret A Payseur
Journal:  Genetics       Date:  2011-07-12       Impact factor: 4.562

7.  Collaborative Cross mice and their power to map host susceptibility to Aspergillus fumigatus infection.

Authors:  Caroline Durrant; Hanna Tayem; Binnaz Yalcin; James Cleak; Leo Goodstadt; Fernando Pardo-Manuel de Villena; Richard Mott; Fuad A Iraqi
Journal:  Genome Res       Date:  2011-04-14       Impact factor: 9.043

8.  Genetic analysis in the Collaborative Cross breeding population.

Authors:  Vivek M Philip; Greta Sokoloff; Cheryl L Ackert-Bicknell; Martin Striz; Lisa Branstetter; Melissa A Beckmann; Jason S Spence; Barbara L Jackson; Leslie D Galloway; Paul Barker; Ann M Wymore; Patricia R Hunsicker; David C Durtschi; Ginger S Shaw; Sarah Shinpock; Kenneth F Manly; Darla R Miller; Kevin D Donohue; Cymbeline T Culiat; Gary A Churchill; William R Lariviere; Abraham A Palmer; Bruce F O'Hara; Brynn H Voy; Elissa J Chesler
Journal:  Genome Res       Date:  2011-07-06       Impact factor: 9.043

9.  Brain tumor susceptibility: the role of genetic factors and uses of mouse models to unravel risk.

Authors:  Karlyne M Reilly
Journal:  Brain Pathol       Date:  2009-01       Impact factor: 6.508

Review 10.  The Collaborative Cross mouse model for dissecting genetic susceptibility to infectious diseases.

Authors:  Hanifa Abu Toamih Atamni; Aysar Nashef; Fuad A Iraqi
Journal:  Mamm Genome       Date:  2018-08-24       Impact factor: 2.957
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