Literature DB >> 18517463

Quantitative function for community detection.

Zhenping Li1, Shihua Zhang, Rui-Sheng Wang, Xiang-Sun Zhang, Luonan Chen.   

Abstract

We propose a quantitative function for community partition -- i.e., modularity density or D value. We demonstrate that this quantitative function is superior to the widely used modularity Q and also prove its equivalence with the objective function of the kernel k means. Both theoretical and numerical results show that optimizing the new criterion not only can resolve detailed modules that existing approaches cannot achieve, but also can correctly identify the number of communities.

Year:  2008        PMID: 18517463     DOI: 10.1103/PhysRevE.77.036109

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  16 in total

1.  Link-Prediction Enhanced Consensus Clustering for Complex Networks.

Authors:  Matthew Burgess; Eytan Adar; Michael Cafarella
Journal:  PLoS One       Date:  2016-05-20       Impact factor: 3.240

2.  Determining modular organization of protein interaction networks by maximizing modularity density.

Authors:  Shihua Zhang; Xue-Mei Ning; Chris Ding; Xiang-Sun Zhang
Journal:  BMC Syst Biol       Date:  2010-09-13

3.  Illuminating drug action by network integration of disease genes: a case study of myocardial infarction.

Authors:  Rui-Sheng Wang; Joseph Loscalzo
Journal:  Mol Biosyst       Date:  2016-04-26

4.  Construction and analysis of single nucleotide polymorphism-single nucleotide polymorphism interaction networks.

Authors:  Yang Liu; Xutao Li; Zhiping Liu; Luonan Chen; Michael K Ng
Journal:  IET Syst Biol       Date:  2013-10       Impact factor: 1.615

5.  Hierarchical modular structure identification with its applications in gene coexpression networks.

Authors:  Shuqin Zhang
Journal:  ScientificWorldJournal       Date:  2012-12-30

6.  Module detection in complex networks using integer optimisation.

Authors:  Gang Xu; Laura Bennett; Lazaros G Papageorgiou; Sophia Tsoka
Journal:  Algorithms Mol Biol       Date:  2010-11-12       Impact factor: 1.405

7.  An iterative network partition algorithm for accurate identification of dense network modules.

Authors:  Siqi Sun; Xinran Dong; Yao Fu; Weidong Tian
Journal:  Nucleic Acids Res       Date:  2011-11-25       Impact factor: 16.971

8.  Decomposition-based multiobjective evolutionary algorithm for community detection in dynamic social networks.

Authors:  Jingjing Ma; Jie Liu; Wenping Ma; Maoguo Gong; Licheng Jiao
Journal:  ScientificWorldJournal       Date:  2014-03-02

9.  Discovering link communities in complex networks by an integer programming model and a genetic algorithm.

Authors:  Zhenping Li; Xiang-Sun Zhang; Rui-Sheng Wang; Hongwei Liu; Shihua Zhang
Journal:  PLoS One       Date:  2013-12-30       Impact factor: 3.240

10.  Z-Score-Based Modularity for Community Detection in Networks.

Authors:  Atsushi Miyauchi; Yasushi Kawase
Journal:  PLoS One       Date:  2016-01-25       Impact factor: 3.240

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