Literature DB >> 18514360

Dinoflagellates: a mitochondrial genome all at sea.

Edmund A Nash1, R Ellen R Nisbet, Adrian C Barbrook, Christopher J Howe.   

Abstract

Dinoflagellate algae are notorious for their highly unusual organization of nuclear and chloroplast genomes. Early studies on the dinoflagellate mitochondrial genome indicated that it encodes the same three protein-coding genes found in Plasmodium spp., but with a complex organization and transcript editing. Recent work has extended this view, showing that the dinoflagellate mitochondrial genome contains a wide array of gene fragments and genes interspersed with noncoding inverted repeats. The genome seems to require noncanonical start and stop codons, as well as high levels of editing, trans-splicing and the addition of oligonucleotide caps at the 5' and 3' ends of transcripts. Despite its small coding content, the dinoflagellate mitochondrial genome is one of the most complex known.

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Year:  2008        PMID: 18514360     DOI: 10.1016/j.tig.2008.04.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  22 in total

Review 1.  Gene fragmentation: a key to mitochondrial genome evolution in Euglenozoa?

Authors:  Pavel Flegontov; Michael W Gray; Gertraud Burger; Julius Lukeš
Journal:  Curr Genet       Date:  2011-05-05       Impact factor: 3.886

Review 2.  Organization and expression of organellar genomes.

Authors:  Adrian C Barbrook; Christopher J Howe; Davy P Kurniawan; Sarah J Tarr
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-03-12       Impact factor: 6.237

Review 3.  Integration of plastids with their hosts: Lessons learned from dinoflagellates.

Authors:  Richard G Dorrell; Christopher J Howe
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-20       Impact factor: 11.205

4.  Major transitions in dinoflagellate evolution unveiled by phylotranscriptomics.

Authors:  Jan Janouškovec; Gregory S Gavelis; Fabien Burki; Donna Dinh; Tsvetan R Bachvaroff; Sebastian G Gornik; Kelley J Bright; Behzad Imanian; Suzanne L Strom; Charles F Delwiche; Ross F Waller; Robert A Fensome; Brian S Leander; Forest L Rohwer; Juan F Saldarriaga
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-27       Impact factor: 11.205

5.  Highly divergent mitochondrial ATP synthase complexes in Tetrahymena thermophila.

Authors:  Praveen Balabaskaran Nina; Natalya V Dudkina; Lesley A Kane; Jennifer E van Eyk; Egbert J Boekema; Michael W Mather; Akhil B Vaidya
Journal:  PLoS Biol       Date:  2010-07-13       Impact factor: 8.029

6.  Characterisation of full-length mitochondrial copies and partial nuclear copies (numts) of the cytochrome b and cytochrome c oxidase subunit I genes of Toxoplasma gondii, Neospora caninum, Hammondia heydorni and Hammondia triffittae (Apicomplexa: Sarcocystidae).

Authors:  Bjørn Gjerde
Journal:  Parasitol Res       Date:  2013-01-29       Impact factor: 2.289

7.  Cascades of convergent evolution: the corresponding evolutionary histories of euglenozoans and dinoflagellates.

Authors:  Julius Lukes; Brian S Leander; Patrick J Keeling
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-15       Impact factor: 11.205

8.  A widespread and unusual RNA trans-splicing type in dinoflagellate mitochondria.

Authors:  Christopher J Jackson; Ross F Waller
Journal:  PLoS One       Date:  2013-02-20       Impact factor: 3.240

9.  Extensive frameshift at all AGG and CCC codons in the mitochondrial cytochrome c oxidase subunit 1 gene of Perkinsus marinus (Alveolata; Dinoflagellata).

Authors:  Isao Masuda; Motomichi Matsuzaki; Kiyoshi Kita
Journal:  Nucleic Acids Res       Date:  2010-05-27       Impact factor: 16.971

10.  Fragmentation of the large subunit ribosomal RNA gene in oyster mitochondrial genomes.

Authors:  Coren A Milbury; Jung C Lee; Jamie J Cannone; Patrick M Gaffney; Robin R Gutell
Journal:  BMC Genomics       Date:  2010-09-02       Impact factor: 3.969

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