Literature DB >> 18506876

A chemical library approach to organic-modified peptide ligands for PDZ domain proteins: a synthetic, thermodynamic and structural investigation.

D Gomika Udugamasooriya1, Sudhir C Sharma, Mark R Spaller.   

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Year:  2008        PMID： 18506876      PMCID： PMC3000795          DOI： 10.1002/cbic.200800126

Source DB:  PubMed          Journal:  Chembiochem        ISSN： 1439-4227            Impact factor:   3.164


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  10 in total

Review 1.  Assembly of cell regulatory systems through protein interaction domains.

Authors:  Tony Pawson; Piers Nash
Journal:  Science       Date:  2003-04-18       Impact factor: 47.728

2.  Treatment of ischemic brain damage by perturbing NMDA receptor- PSD-95 protein interactions.

Authors:  Michelle Aarts; Yitao Liu; Lidong Liu; Shintaro Besshoh; Mark Arundine; James W Gurd; Yu-Tian Wang; Michael W Salter; Michael Tymianski
Journal:  Science       Date:  2002-10-25       Impact factor: 47.728

3.  PSD-95 regulates synaptic transmission and plasticity in rat cerebral cortex.

Authors:  Jean-Claude Béïque; Rodrigo Andrade
Journal:  J Physiol       Date:  2003-02-01       Impact factor: 5.182

Review 4.  PDZ domain proteins of synapses.

Authors:  Eunjoon Kim; Morgan Sheng
Journal:  Nat Rev Neurosci       Date:  2004-10       Impact factor: 34.870

Review 5.  Protein-protein interaction analysis by nuclear magnetic resonance spectroscopy.

Authors:  Guanghua Gao; Jason G Williams; Sharon L Campbell
Journal:  Methods Mol Biol       Date:  2004

Review 6.  Signaling protein inhibitors via the combinatorial modification of peptide scaffolds.

Authors:  David S Lawrence
Journal:  Biochim Biophys Acta       Date:  2005-09-12

7.  A thermodynamic ligand binding study of the third PDZ domain (PDZ3) from the mammalian neuronal protein PSD-95.

Authors:  Dorina Saro; Tao Li; Chamila Rupasinghe; Azrael Paredes; Nicole Caspers; Mark R Spaller
Journal:  Biochemistry       Date:  2007-05-03       Impact factor: 3.162

8.  Synapse-specific regulation of AMPA receptor function by PSD-95.

Authors:  Jean-Claude Béïque; Da-Ting Lin; Myoung-Goo Kang; Hiro Aizawa; Kogo Takamiya; Richard L Huganir
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-05       Impact factor: 11.205

9.  Entropy-enthalpy compensation: fact or artifact?

Authors:  K Sharp
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

10.  PDZ protein interactions underlying NMDA receptor-mediated excitotoxicity and neuroprotection by PSD-95 inhibitors.

Authors:  Hong Cui; Amy Hayashi; Hong-Shuo Sun; Michael P Belmares; Carolyn Cobey; Thuymy Phan; Johannes Schweizer; Michael W Salter; Yu Tian Wang; R Andrew Tasker; David Garman; Joshua Rabinowitz; Peter S Lu; Michael Tymianski
Journal:  J Neurosci       Date:  2007-09-12       Impact factor: 6.167
  10 in total
  10 in total

1.  Inhibition of endoglin-GIPC interaction inhibits pancreatic cancer cell growth.

Authors:  Krishnendu Pal; Alexandre A Pletnev; Shamit K Dutta; Enfeng Wang; Ruizhi Zhao; Aradhita Baral; Vinod Kumar Yadav; Suruchi Aggarwal; Soundararajan Krishnaswamy; Khalid M Alkharfy; Shantanu Chowdhury; Mark R Spaller; Debabrata Mukhopadhyay
Journal:  Mol Cancer Ther       Date:  2014-08-14       Impact factor: 6.261

2.  Chemically modified peptides targeting the PDZ domain of GIPC as a therapeutic approach for cancer.

Authors:  Chitta Ranjan Patra; Chamila N Rupasinghe; Shamit K Dutta; Santanu Bhattacharya; Enfeng Wang; Mark R Spaller; Debabrata Mukhopadhyay
Journal:  ACS Chem Biol       Date:  2012-02-15       Impact factor: 5.100

3.  Synthesis and screening of peptide libraries with free C-termini.

Authors:  Yen-Chih Wang; Mark D Distefano
Journal:  Curr Top Pept Protein Res       Date:  2014

4.  Structure-activity relationships of a small-molecule inhibitor of the PDZ domain of PICK1.

Authors:  Anders Bach; Nicolai Stuhr-Hansen; Thor S Thorsen; Nicolai Bork; Irina S Moreira; Karla Frydenvang; Shahrokh Padrah; S Brøgger Christensen; Kenneth L Madsen; Harel Weinstein; Ulrik Gether; Kristian Strømgaard
Journal:  Org Biomol Chem       Date:  2010-07-29       Impact factor: 3.876

5.  PDZ domains and their binding partners: structure, specificity, and modification.

Authors:  Ho-Jin Lee; Jie J Zheng
Journal:  Cell Commun Signal       Date:  2010-05-28       Impact factor: 5.712

6.  An in silico analysis of the binding modes and binding affinities of small molecule modulators of PDZ-peptide interactions.

Authors:  Garima Tiwari; Debasisa Mohanty
Journal:  PLoS One       Date:  2013-08-08       Impact factor: 3.240

7.  Chemically modified peptide scaffolds target the CFTR-associated ligand PDZ domain.

Authors:  Jeanine F Amacher; Ruizhi Zhao; Mark R Spaller; Dean R Madden
Journal:  PLoS One       Date:  2014-08-19       Impact factor: 3.240

Review 8.  PDZ Domains as Drug Targets.

Authors:  Nikolaj R Christensen; Jelena Čalyševa; Eduardo F A Fernandes; Susanne Lüchow; Louise S Clemmensen; Linda M Haugaard-Kedström; Kristian Strømgaard
Journal:  Adv Ther (Weinh)       Date:  2019-04-24

9.  Identification of β-strand mediated protein-protein interaction inhibitors using ligand-directed fragment ligation.

Authors:  Zsófia Hegedüs; Fruzsina Hóbor; Deborah K Shoemark; Sergio Celis; Lu-Yun Lian; Chi H Trinh; Richard B Sessions; Thomas A Edwards; Andrew J Wilson
Journal:  Chem Sci       Date:  2021-01-06       Impact factor: 9.825

10.  Sensing the allosteric force.

Authors:  Olga Bozovic; Brankica Jankovic; Peter Hamm
Journal:  Nat Commun       Date:  2020-11-17       Impact factor: 14.919
  10 in total

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