Literature DB >> 18505737

NMR insights into a megadalton-size protein self-assembly.

Jeetender Chugh1, Shilpy Sharma, Ramakrishna V Hosur.   

Abstract

Protein self-association is critical to many biological functions. However, atomic-level structural characterization of these assemblies has remained elusive. In this report we present insights into the mechanistic details of the process of self-association of the 136-residue GTPase effector domain (GED) of the endocytic protein dynamin into a megadalton-sized soluble mass. Our approach is based on NMR monitoring of regulated folding and association through Gdn-HCl titration. The results suggest the evolution of a sequence-self-association paradigm. Equally significantly, the study demonstrates an elegant bottom-up strategy that can render large protein self-assemblies accessible to NMR investigations that have remained difficult to date.

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Year:  2008        PMID: 18505737      PMCID: PMC2492821          DOI: 10.1110/ps.035840.108

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  28 in total

1.  TROSY and CRINEPT: NMR with large molecular and supramolecular structures in solution.

Authors:  R Riek; K Pervushin; K Wüthrich
Journal:  Trends Biochem Sci       Date:  2000-10       Impact factor: 13.807

Review 2.  Dynamin and its role in membrane fission.

Authors:  J E Hinshaw
Journal:  Annu Rev Cell Dev Biol       Date:  2000       Impact factor: 13.827

Review 3.  NMR spectroscopy: a multifaceted approach to macromolecular structure.

Authors:  A E Ferentz; G Wagner
Journal:  Q Rev Biophys       Date:  2000-02       Impact factor: 5.318

4.  Structural characterization of the large soluble oligomers of the GTPase effector domain of dynamin.

Authors:  Jeetender Chugh; Amarnath Chatterjee; Ashutosh Kumar; Ram Kumar Mishra; Rohit Mittal; Ramakrishna V Hosur
Journal:  FEBS J       Date:  2006-01       Impact factor: 5.542

5.  Quantitative dynamics and binding studies of the 20S proteasome by NMR.

Authors:  Remco Sprangers; Lewis E Kay
Journal:  Nature       Date:  2007-01-21       Impact factor: 49.962

Review 6.  Solution NMR of large molecules and assemblies.

Authors:  Mark P Foster; Craig A McElroy; Carlos D Amero
Journal:  Biochemistry       Date:  2007-01-16       Impact factor: 3.162

7.  Tuning the HNN experiment: generation of serine-threonine check points.

Authors:  Jeetender Chugh; Dinesh Kumar; Ramakrishna V Hosur
Journal:  J Biomol NMR       Date:  2007-12-28       Impact factor: 2.835

8.  SOFAST-HMQC experiments for recording two-dimensional heteronuclear correlation spectra of proteins within a few seconds.

Authors:  Paul Schanda; Eriks Kupce; Bernhard Brutscher
Journal:  J Biomol NMR       Date:  2005-12       Impact factor: 2.835

9.  Residue-level NMR view of the urea-driven equilibrium folding transition of SUMO-1 (1-97): native preferences do not increase monotonously.

Authors:  Ashutosh Kumar; Sudha Srivastava; Ram Kumar Mishra; Rohit Mittal; Ramakrishna V Hosur
Journal:  J Mol Biol       Date:  2006-06-19       Impact factor: 5.469

10.  TROSY in triple-resonance experiments: new perspectives for sequential NMR assignment of large proteins.

Authors:  M Salzmann; K Pervushin; G Wider; H Senn; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-10       Impact factor: 11.205

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  3 in total

1.  High-resolution conformation and backbone dynamics of a soluble aggregate of apomyoglobin119.

Authors:  Senapathy Rajagopalan; Neşe Kurt; Silvia Cavagnero
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

2.  Direct observation of protein structural transitions through entire amyloid aggregation processes in water using 2D-IR spectroscopy.

Authors:  So Yeon Chun; Myung Kook Son; Chae Ri Park; Chaiho Lim; Hugh I Kim; Kyungwon Kwak; Minhaeng Cho
Journal:  Chem Sci       Date:  2022-03-18       Impact factor: 9.969

3.  NMR derived model of GTPase effector domain (GED) self association: relevance to dynamin assembly.

Authors:  Swagata Chakraborty; Supriya Pratihar; Ramakrishna V Hosur
Journal:  PLoS One       Date:  2012-01-12       Impact factor: 3.240

  3 in total

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