Literature DB >> 18503548

Deep-sea vent chemoautotrophs: diversity, biochemistry and ecological significance.

Satoshi Nakagawa1, Ken Takai.   

Abstract

Deep-sea vents support productive ecosystems driven primarily by chemoautotrophs. Chemoautotrophs are organisms that are able to fix inorganic carbon using a chemical energy obtained through the oxidation of reduced compounds. Following the discovery of deep-sea vent ecosystems in 1977, there has been an increasing knowledge that deep-sea vent chemoautotrophs display remarkable physiological and phylogenetic diversity. Cultivation-dependent and -independent studies have led to an emerging view that the majority of deep-sea vent chemoautotrophs have the ability to derive energy from a variety of redox couples other than the conventional sulfur-oxygen couple, and fix inorganic carbon via the reductive tricarboxylic acid cycle. In addition, recent genomic, metagenomic and postgenomic studies have considerably accelerated the comprehensive understanding of molecular mechanisms of deep-sea vent chemoautotrophy, even in yet uncultivable endosymbionts of vent fauna. Genomic analysis also suggested that there are previously unrecognized evolutionary links between deep-sea vent chemoautotrophs and important human/animal pathogens. This review summarizes chemoautotrophy in deep-sea vents, highlighting recent biochemical and genomic discoveries.

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Year:  2008        PMID: 18503548     DOI: 10.1111/j.1574-6941.2008.00502.x

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  84 in total

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Journal:  Microb Ecol       Date:  2011-10-27       Impact factor: 4.552

2.  Spatial distribution of viruses associated with planktonic and attached microbial communities in hydrothermal environments.

Authors:  Yukari Yoshida-Takashima; Takuro Nunoura; Hiromi Kazama; Takuroh Noguchi; Kazuhiro Inoue; Hironori Akashi; Toshiro Yamanaka; Tomohiro Toki; Masahiro Yamamoto; Yasuo Furushima; Yuichiro Ueno; Hiroyuki Yamamoto; Ken Takai
Journal:  Appl Environ Microbiol       Date:  2011-12-30       Impact factor: 4.792

3.  Distribution and phylogenetic diversity of cbbM genes encoding RubisCO form II in a deep-sea hydrothermal field revealed by newly designed PCR primers.

Authors:  Shingo Kato; Michiyuki Nakawake; Moriya Ohkuma; Akihiko Yamagishi
Journal:  Extremophiles       Date:  2012-01-03       Impact factor: 2.395

4.  Genome and physiology of a model Epsilonproteobacterium responsible for sulfide detoxification in marine oxygen depletion zones.

Authors:  Jana Grote; Thomas Schott; Christian G Bruckner; Frank Oliver Glöckner; Günter Jost; Hanno Teeling; Matthias Labrenz; Klaus Jürgens
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-27       Impact factor: 11.205

5.  Comparative metagenomics of microbial communities inhabiting deep-sea hydrothermal vent chimneys with contrasting chemistries.

Authors:  Wei Xie; Fengping Wang; Lei Guo; Zeling Chen; Stefan M Sievert; Jun Meng; Guangrui Huang; Yuxin Li; Qingyu Yan; Shan Wu; Xin Wang; Shangwu Chen; Guangyuan He; Xiang Xiao; Anlong Xu
Journal:  ISME J       Date:  2010-10-07       Impact factor: 10.302

6.  Thiosulfate-dependent chemolithoautotrophic growth of Bradyrhizobium japonicum.

Authors:  Sachiko Masuda; Shima Eda; Seishi Ikeda; Hisayuki Mitsui; Kiwamu Minamisawa
Journal:  Appl Environ Microbiol       Date:  2010-02-19       Impact factor: 4.792

7.  The divergence and natural selection of autocatalytic primordial metabolic systems.

Authors:  Sergey A Marakushev; Ol'ga V Belonogova
Journal:  Orig Life Evol Biosph       Date:  2013-07-17       Impact factor: 1.950

8.  Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont.

Authors:  Satoshi Nakagawa; Shigeru Shimamura; Yoshihiro Takaki; Yohey Suzuki; Shun-ichi Murakami; Tamaki Watanabe; So Fujiyoshi; Sayaka Mino; Tomoo Sawabe; Takahiro Maeda; Hiroko Makita; Suguru Nemoto; Shin-Ichiro Nishimura; Hiromi Watanabe; Tomo-o Watsuji; Ken Takai
Journal:  ISME J       Date:  2013-08-08       Impact factor: 10.302

9.  Comparative transcriptome analysis of Rimicaris sp. reveals novel molecular features associated with survival in deep-sea hydrothermal vent.

Authors:  Jian Zhang; Qing-Lei Sun; Zhen-Dong Luan; Chao Lian; Li Sun
Journal:  Sci Rep       Date:  2017-05-17       Impact factor: 4.379

Review 10.  Distribution of CO(2) fixation and acetate mineralization pathways in microorganisms from extremophilic anaerobic biotopes.

Authors:  Lilia Montoya; Lourdes B Celis; Elías Razo-Flores; Angel G Alpuche-Solís
Journal:  Extremophiles       Date:  2012-10-12       Impact factor: 2.395

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