Literature DB >> 18496710

A review of the methods for signal estimation in stochastic diffusion leaky integrate-and-fire neuronal models.

Petr Lansky1, Susanne Ditlevsen.   

Abstract

Parameters in diffusion neuronal models are divided into two groups; intrinsic and input parameters. Intrinsic parameters are related to the properties of the neuronal membrane and are assumed to be known throughout the paper. Input parameters characterize processes generated outside the neuron and methods for their estimation are reviewed here. Two examples of the diffusion neuronal model, which are based on the integrate-and-fire concept, are investigated--the Ornstein--Uhlenbeck model as the most common one and the Feller model as an illustration of state-dependent behavior in modeling the neuronal input. Two types of experimental data are assumed-intracellular describing the membrane trajectories and extracellular resulting in knowledge of the interspike intervals. The literature on estimation from the trajectories of the diffusion process is extensive and thus the stress in this review is set on the inference made from the interspike intervals.

Mesh:

Year:  2008        PMID: 18496710     DOI: 10.1007/s00422-008-0237-x

Source DB:  PubMed          Journal:  Biol Cybern        ISSN: 0340-1200            Impact factor:   2.086


  13 in total

1.  The Morris-Lecar neuron model embeds a leaky integrate-and-fire model.

Authors:  Susanne Ditlevsen; Priscilla Greenwood
Journal:  J Math Biol       Date:  2012-05-24       Impact factor: 2.259

2.  Fast inference of interactions in assemblies of stochastic integrate-and-fire neurons from spike recordings.

Authors:  Remi Monasson; Simona Cocco
Journal:  J Comput Neurosci       Date:  2011-01-11       Impact factor: 1.621

3.  A sequential Monte Carlo approach to estimate biophysical neural models from spikes.

Authors:  Liang Meng; Mark A Kramer; Uri T Eden
Journal:  J Neural Eng       Date:  2011-11-04       Impact factor: 5.379

4.  Some Dissimilarity Measures of Branching Processes and Optimal Decision Making in the Presence of Potential Pandemics.

Authors:  Niels B Kammerer; Wolfgang Stummer
Journal:  Entropy (Basel)       Date:  2020-08-08       Impact factor: 2.524

5.  Motoneuron membrane potentials follow a time inhomogeneous jump diffusion process.

Authors:  Patrick Jahn; Rune W Berg; Jørn Hounsgaard; Susanne Ditlevsen
Journal:  J Comput Neurosci       Date:  2011-04-09       Impact factor: 1.621

6.  Made-to-order spiking neuron model equipped with a multi-timescale adaptive threshold.

Authors:  Ryota Kobayashi; Yasuhiro Tsubo; Shigeru Shinomoto
Journal:  Front Comput Neurosci       Date:  2009-07-30       Impact factor: 2.380

7.  Synapses with short-term plasticity are optimal estimators of presynaptic membrane potentials.

Authors:  Jean-Pascal Pfister; Peter Dayan; Máté Lengyel
Journal:  Nat Neurosci       Date:  2010-09-19       Impact factor: 24.884

8.  Parameter inference from hitting times for perturbed Brownian motion.

Authors:  Massimiliano Tamborrino; Susanne Ditlevsen; Peter Lansky
Journal:  Lifetime Data Anal       Date:  2014-09-04       Impact factor: 1.588

9.  Estimation of the synaptic input firing rates and characterization of the stimulation effects in an auditory neuron.

Authors:  Ryota Kobayashi; Jufang He; Petr Lansky
Journal:  Front Comput Neurosci       Date:  2015-05-18       Impact factor: 2.380

10.  A unified approach to linking experimental, statistical and computational analysis of spike train data.

Authors:  Liang Meng; Mark A Kramer; Steven J Middleton; Miles A Whittington; Uri T Eden
Journal:  PLoS One       Date:  2014-01-17       Impact factor: 3.240

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