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Literature DB >> 18493082

On the "NPD ratio" as a test for crossover interference.

Abstract

The "NPD ratio," widely used by yeast geneticists, is of limited applicability and is prone to falsely indicate significant crossover interference in a chi-square test. A simple, better chi-square test for interference in two-factor crosses is described.

Entities: Species

Mesh：

Year: 2008 PMID： 18493082 PMCID： PMC2390647 DOI： 10.1534/genetics.108.086918

Source DB: PubMed Journal: Genetics ISSN： 0016-6731 Impact factor: 4.562

7 in total

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12 in total

1. A two-pathway analysis of meiotic crossing over and gene conversion in Saccharomyces cerevisiae.

Authors: Franklin W Stahl; Henriette M Foss
Journal: Genetics Date: 2010-08-02 Impact factor: 4.562

2. Distinct Functions in Regulation of Meiotic Crossovers for DNA Damage Response Clamp Loader Rad24 (Rad17) and Mec1(ATR) Kinase.

Authors:
Journal: Genetics Date: 2020-12 Impact factor: 4.562

3. Rad51 is an accessory factor for Dmc1-mediated joint molecule formation during meiosis.

Authors: Veronica Cloud; Yuen-Ling Chan; Jennifer Grubb; Brian Budke; Douglas K Bishop
Journal: Science Date: 2012-09-07 Impact factor: 47.728

4. Genetic analysis of baker's yeast Msh4-Msh5 reveals a threshold crossover level for meiotic viability.

Authors: K T Nishant; Cheng Chen; Miki Shinohara; Akira Shinohara; Eric Alani
Journal: PLoS Genet Date: 2010-08-26 Impact factor: 5.917

5. Defining and detecting crossover-interference mutants in yeast.

Authors: Frank Stahl
Journal: PLoS One Date: 2012-06-06 Impact factor: 3.240

6. SUMO fosters assembly and functionality of the MutSγ complex to facilitate meiotic crossing over.

Authors: Wei He; Gerrik F Verhees; Nikhil Bhagwat; Ye Yang; Dhananjaya S Kulkarni; Zane Lombardo; Sudipta Lahiri; Pritha Roy; Jiaming Zhuo; Brian Dang; Andriana Snyder; Shashank Shastry; Michael Moezpoor; Lilly Alocozy; Kathy Gyehyun Lee; Daniel Painter; Ishita Mukerji; Neil Hunter
Journal: Dev Cell Date: 2021-07-01 Impact factor: 13.417

7. Evidence that histone H1 is dispensable for proper meiotic recombination in budding yeast.

Authors: George S Brush
Journal: BMC Res Notes Date: 2015-06-30

8. Pch2 links chromosome axis remodeling at future crossover sites and crossover distribution during yeast meiosis.

Authors: Neeraj Joshi; Aekam Barot; Christine Jamison; G Valentin Börner
Journal: PLoS Genet Date: 2009-07-24 Impact factor: 5.917

9. The pch2Delta mutation in baker's yeast alters meiotic crossover levels and confers a defect in crossover interference.

Authors: Sarah Zanders; Eric Alani
Journal: PLoS Genet Date: 2009-07-24 Impact factor: 5.917

10. Low levels of DNA polymerase alpha induce mitotic and meiotic instability in the ribosomal DNA gene cluster of Saccharomyces cerevisiae.

Authors: Anne M Casper; Piotr A Mieczkowski; Malgorzata Gawel; Thomas D Petes
Journal: PLoS Genet Date: 2008-06-27 Impact factor: 5.917