Literature DB >> 18492667

ATP hydrolysis and synthesis of a rotary motor V-ATPase from Thermus thermophilus.

Masahiro Nakano1, Hiromi Imamura, Masashi Toei, Masatada Tamakoshi, Masasuke Yoshida, Ken Yokoyama.   

Abstract

Vacuolar-type H(+)-ATPase (V-ATPase) catalyzes ATP synthesis and hydrolysis coupled with proton translocation across membranes via a rotary motor mechanism. Here we report biochemical and biophysical catalytic properties of V-ATPase from Thermus thermophilus. ATP hydrolysis of V-ATPase was severely inhibited by entrapment of Mg-ADP in the catalytic site. In contrast, the enzyme was very active for ATP synthesis (approximately 70 s(-1)) with the K(m) values for ADP and phosphate being 4.7 +/- 0.5 and 460 +/- 30 microm, respectively. Single molecule observation showed V-ATPase rotated in a 120 degrees stepwise manner, and analysis of dwelling time allowed the binding rate constant k(on) for ATP to be estimated ( approximately 1.1 x 10(6) m(-1) s(-1)), which was much lower than the k(on) (= V(max)/K(m)) for ADP ( approximately 1.4 x 10(7) m(-1) s(-1)). The slower k(on)(ATP) than k(on)(ADP) and strong Mg-ADP inhibition may contribute to prevent wasteful consumption of ATP under in vivo conditions when the proton motive force collapses.

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Year:  2008        PMID: 18492667      PMCID: PMC3258951          DOI: 10.1074/jbc.M801276200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  33 in total

Review 1.  A rotary molecular motor that can work at near 100% efficiency.

Authors:  K Kinosita; R Yasuda; H Noji; K Adachi
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2000-04-29       Impact factor: 6.237

2.  Pause and rotation of F(1)-ATPase during catalysis.

Authors:  Y Hirono-Hara; H Noji; M Nishiura; E Muneyuki; K Y Hara; R Yasuda; K Kinosita; M Yoshida
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-13       Impact factor: 11.205

Review 3.  ATP synthase--a marvellous rotary engine of the cell.

Authors:  M Yoshida; E Muneyuki; T Hisabori
Journal:  Nat Rev Mol Cell Biol       Date:  2001-09       Impact factor: 94.444

4.  Subunit rotation of vacuolar-type proton pumping ATPase: relative rotation of the G and C subunits.

Authors:  Tomoyuki Hirata; Atsuko Iwamoto-Kihara; Ge-Hong Sun-Wada; Toshihide Okajima; Yoh Wada; Masamitsu Futai
Journal:  J Biol Chem       Date:  2003-04-01       Impact factor: 5.157

5.  Rotation of the proteolipid ring in the V-ATPase.

Authors:  Ken Yokoyama; Masahiro Nakano; Hiromi Imamura; Masasuke Yoshida; Masatada Tamakoshi
Journal:  J Biol Chem       Date:  2003-04-21       Impact factor: 5.157

6.  Evidence for rotation of V1-ATPase.

Authors:  Hiromi Imamura; Masahiro Nakano; Hiroyuki Noji; Eiro Muneyuki; Shoji Ohkuma; Masasuke Yoshida; Ken Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-21       Impact factor: 11.205

7.  Mechanically driven ATP synthesis by F1-ATPase.

Authors:  Hiroyasu Itoh; Akira Takahashi; Kengo Adachi; Hiroyuki Noji; Ryohei Yasuda; Masasuke Yoshida; Kazuhiko Kinosita
Journal:  Nature       Date:  2004-01-29       Impact factor: 49.962

8.  Chemomechanical coupling in F1-ATPase revealed by simultaneous observation of nucleotide kinetics and rotation.

Authors:  Takayuki Nishizaka; Kazuhiro Oiwa; Hiroyuki Noji; Shigeki Kimura; Eiro Muneyuki; Masasuke Yoshida; Kazuhiko Kinosita
Journal:  Nat Struct Mol Biol       Date:  2004-01-18       Impact factor: 15.369

9.  Rotation scheme of V1-motor is different from that of F1-motor.

Authors:  Hiromi Imamura; Mizuho Takeda; Saeko Funamoto; Katsuya Shimabukuro; Masasuke Yoshida; Ken Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-05       Impact factor: 11.205

Review 10.  Regulatory mechanisms of proton-translocating F(O)F (1)-ATP synthase.

Authors:  Boris A Feniouk; Masasuke Yoshida
Journal:  Results Probl Cell Differ       Date:  2008
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  35 in total

1.  The structure of the peripheral stalk of Thermus thermophilus H+-ATPase/synthase.

Authors:  Lawrence K Lee; Alastair G Stewart; Mhairi Donohoe; Ricardo A Bernal; Daniela Stock
Journal:  Nat Struct Mol Biol       Date:  2010-02-21       Impact factor: 15.369

2.  Structure of intact Thermus thermophilus V-ATPase by cryo-EM reveals organization of the membrane-bound V(O) motor.

Authors:  Wilson C Y Lau; John L Rubinstein
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-06       Impact factor: 11.205

3.  V for victory--a V1-ATPase structure revealed.

Authors:  Thomas Boesen; Poul Nissen
Journal:  EMBO Rep       Date:  2009-10-16       Impact factor: 8.807

4.  MgATP hydrolysis destabilizes the interaction between subunit H and yeast V1-ATPase, highlighting H's role in V-ATPase regulation by reversible disassembly.

Authors:  Stuti Sharma; Rebecca A Oot; Stephan Wilkens
Journal:  J Biol Chem       Date:  2018-05-12       Impact factor: 5.157

5.  Methodology for the Simulation of Molecular Motors at Different Scales.

Authors:  Abhishek Singharoy; Christophe Chipot
Journal:  J Phys Chem B       Date:  2016-11-30       Impact factor: 2.991

6.  Mechanical modulation of ATP-binding affinity of V1-ATPase.

Authors:  Naciye Esma Tirtom; Daichi Okuno; Masahiro Nakano; Ken Yokoyama; Hiroyuki Noji
Journal:  J Biol Chem       Date:  2012-11-15       Impact factor: 5.157

7.  Single-molecule analysis of inhibitory pausing states of V1-ATPase.

Authors:  Naciye Esma Uner; Yoshihiro Nishikawa; Daichi Okuno; Masahiro Nakano; Ken Yokoyama; Hiroyuki Noji
Journal:  J Biol Chem       Date:  2012-06-26       Impact factor: 5.157

8.  Torque generation of Enterococcus hirae V-ATPase.

Authors:  Hiroshi Ueno; Yoshihiro Minagawa; Mayu Hara; Suhaila Rahman; Ichiro Yamato; Eiro Muneyuki; Hiroyuki Noji; Takeshi Murata; Ryota Iino
Journal:  J Biol Chem       Date:  2014-09-25       Impact factor: 5.157

9.  Ion mobility-mass spectrometry of a rotary ATPase reveals ATP-induced reduction in conformational flexibility.

Authors:  Min Zhou; Argyris Politis; Roberta Davies; Idlir Liko; Kuan-Jung Wu; Alastair G Stewart; Daniela Stock; Carol V Robinson
Journal:  Nat Chem       Date:  2014-02-16       Impact factor: 24.427

10.  Crystal structure of A3B3 complex of V-ATPase from Thermus thermophilus.

Authors:  Megan J Maher; Satoru Akimoto; Momi Iwata; Koji Nagata; Yoshiko Hori; Masasuke Yoshida; Shigeyuki Yokoyama; So Iwata; Ken Yokoyama
Journal:  EMBO J       Date:  2009-11-05       Impact factor: 11.598

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