Literature DB >> 16330761

Rotation scheme of V1-motor is different from that of F1-motor.

Hiromi Imamura1, Mizuho Takeda, Saeko Funamoto, Katsuya Shimabukuro, Masasuke Yoshida, Ken Yokoyama.   

Abstract

V(1), a water-soluble portion of vacuole-type ATPase (V-ATPase), is an ATP-driven rotary motor, similar to F(1)-ATPase. Hydrolysis of ATP is coupled to unidirectional rotation of the central rotor D and F subunits relative to the A(3)B(3) cylinder. In this study, we analyzed the rotation kinetics of V(1) in detail. At low ATP concentrations, the D subunit rotated stepwise, pausing every 120 degrees . The dwell time between steps revealed that V(1) consumes one ATP per 120 degrees step. V(1) generated torque of approximately 35 pN nm, slightly lower than the approximately 46 pN nm measured for F(1). Noticeably, the angles for both ATP cleavage and binding were apparently the same in V(1), in sharp contrast to F(1), which cleaves ATP at 80 degrees posterior to the binding of ATP. Thus, the mechanochemical cycle of V(1) has marked differences to that of F(1).

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Year:  2005        PMID: 16330761      PMCID: PMC1306795          DOI: 10.1073/pnas.0507764102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

1.  Mechanically driven ATP synthesis by F1-ATPase.

Authors:  Hiroyasu Itoh; Akira Takahashi; Kengo Adachi; Hiroyuki Noji; Ryohei Yasuda; Masasuke Yoshida; Kazuhiko Kinosita
Journal:  Nature       Date:  2004-01-29       Impact factor: 49.962

2.  The F subunit of Thermus thermophilus V1-ATPase promotes ATPase activity but is not necessary for rotation.

Authors:  Hiromi Imamura; Chiyo Ikeda; Masasuke Yoshida; Ken Yokoyama
Journal:  J Biol Chem       Date:  2004-02-12       Impact factor: 5.157

3.  Three-dimensional structure of the intact Thermus thermophilus H+-ATPase/synthase by electron microscopy.

Authors:  Ricardo A Bernal; Daniela Stock
Journal:  Structure       Date:  2004-10       Impact factor: 5.006

4.  Purification and reconstitution of Na+-translocating vacuolar ATPase from Enterococcus hirae.

Authors:  T Murata; K Takase; I Yamato; K Igarashi; Y Kakinuma
Journal:  J Biol Chem       Date:  1997-10-03       Impact factor: 5.157

Review 5.  F1-ATPase: a rotary motor made of a single molecule.

Authors:  K Kinosita; R Yasuda; H Noji; S Ishiwata; M Yoshida
Journal:  Cell       Date:  1998-04-03       Impact factor: 41.582

6.  Direct observation of the rotation of F1-ATPase.

Authors:  H Noji; R Yasuda; M Yoshida; K Kinosita
Journal:  Nature       Date:  1997-03-20       Impact factor: 49.962

Review 7.  The binding change mechanism for ATP synthase--some probabilities and possibilities.

Authors:  P D Boyer
Journal:  Biochim Biophys Acta       Date:  1993-01-08

8.  Isolation of prokaryotic V0V1-ATPase from a thermophilic eubacterium Thermus thermophilus.

Authors:  K Yokoyama; Y Akabane; N Ishii; M Yoshida
Journal:  J Biol Chem       Date:  1994-04-22       Impact factor: 5.157

9.  Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria.

Authors:  J P Abrahams; A G Leslie; R Lutter; J E Walker
Journal:  Nature       Date:  1994-08-25       Impact factor: 49.962

10.  Evidence for the operation of a novel Embden-Meyerhof pathway that involves ADP-dependent kinases during sugar fermentation by Pyrococcus furiosus.

Authors:  S W Kengen; F A de Bok; N D van Loo; C Dijkema; A J Stams; W M de Vos
Journal:  J Biol Chem       Date:  1994-07-01       Impact factor: 5.157

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  36 in total

1.  Basic properties of rotary dynamics of the molecular motor Enterococcus hirae V1-ATPase.

Authors:  Yoshihiro Minagawa; Hiroshi Ueno; Mayu Hara; Yoshiko Ishizuka-Katsura; Noboru Ohsawa; Takaho Terada; Mikako Shirouzu; Shigeyuki Yokoyama; Ichiro Yamato; Eiro Muneyuki; Hiroyuki Noji; Takeshi Murata; Ryota Iino
Journal:  J Biol Chem       Date:  2013-10-02       Impact factor: 5.157

2.  Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase.

Authors:  Nobutaka Numoto; Yu Hasegawa; Kazuki Takeda; Kunio Miki
Journal:  EMBO Rep       Date:  2009-09-25       Impact factor: 8.807

3.  Torque generation mechanism of F1-ATPase upon NTP binding.

Authors:  Hidenobu C Arai; Ayako Yukawa; Ryu John Iwatate; Mako Kamiya; Rikiya Watanabe; Yasuteru Urano; Hiroyuki Noji
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

4.  Mechanical modulation of ATP-binding affinity of V1-ATPase.

Authors:  Naciye Esma Tirtom; Daichi Okuno; Masahiro Nakano; Ken Yokoyama; Hiroyuki Noji
Journal:  J Biol Chem       Date:  2012-11-15       Impact factor: 5.157

5.  Rotation mechanism of Enterococcus hirae V1-ATPase based on asymmetric crystal structures.

Authors:  Satoshi Arai; Shinya Saijo; Kano Suzuki; Kenji Mizutani; Yoshimi Kakinuma; Yoshiko Ishizuka-Katsura; Noboru Ohsawa; Takaho Terada; Mikako Shirouzu; Shigeyuki Yokoyama; So Iwata; Ichiro Yamato; Takeshi Murata
Journal:  Nature       Date:  2013-01-13       Impact factor: 49.962

6.  Single-molecule analysis of inhibitory pausing states of V1-ATPase.

Authors:  Naciye Esma Uner; Yoshihiro Nishikawa; Daichi Okuno; Masahiro Nakano; Ken Yokoyama; Hiroyuki Noji
Journal:  J Biol Chem       Date:  2012-06-26       Impact factor: 5.157

7.  F-subunit reinforces torque generation in V-ATPase.

Authors:  Jun-ichi Kishikawa; Akihiko Seino; Atsuko Nakanishi; Naciye Esma Tirtom; Hiroyuki Noji; Ken Yokoyama; Kumiko Hayashi
Journal:  Eur Biophys J       Date:  2014-07-11       Impact factor: 1.733

8.  Mechanical operation and intersubunit coordination of ring-shaped molecular motors: insights from single-molecule studies.

Authors:  Shixin Liu; Gheorghe Chistol; Carlos Bustamante
Journal:  Biophys J       Date:  2014-05-06       Impact factor: 4.033

9.  Mechanism of inhibition of the V-type molecular motor by tributyltin chloride.

Authors:  Mizuho Takeda; Chiyo Suno-Ikeda; Katsuya Shimabukuro; Masasuke Yoshida; Ken Yokoyama
Journal:  Biophys J       Date:  2009-02       Impact factor: 4.033

10.  Crystal structure of A3B3 complex of V-ATPase from Thermus thermophilus.

Authors:  Megan J Maher; Satoru Akimoto; Momi Iwata; Koji Nagata; Yoshiko Hori; Masasuke Yoshida; Shigeyuki Yokoyama; So Iwata; Ken Yokoyama
Journal:  EMBO J       Date:  2009-11-05       Impact factor: 11.598

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