Literature DB >> 18487291

Moment closure for local control models of calcium-induced calcium release in cardiac myocytes.

George S B Williams1, Marco A Huertas, Eric A Sobie, M Saleet Jafri, Gregory D Smith.   

Abstract

In prior work, we introduced a probability density approach to modeling local control of Ca2+-induced Ca2+ release in cardiac myocytes, where we derived coupled advection-reaction equations for the time-dependent bivariate probability density of subsarcolemmal subspace and junctional sarcoplasmic reticulum (SR) [Ca2+] conditioned on Ca2+ release unit (CaRU) state. When coupled to ordinary differential equations (ODEs) for the bulk myoplasmic and network SR [Ca2+], a realistic but minimal model of cardiac excitation-contraction coupling was produced that avoids the computationally demanding task of resolving spatial aspects of global Ca2+ signaling, while accurately representing heterogeneous local Ca2+ signals in a population of diadic subspaces and junctional SR depletion domains. Here we introduce a computationally efficient method for simulating such whole cell models when the dynamics of subspace [Ca2+] are much faster than those of junctional SR [Ca2+]. The method begins with the derivation of a system of ODEs describing the time-evolution of the moments of the univariate probability density functions for junctional SR [Ca2+] jointly distributed with CaRU state. This open system of ODEs is then closed using an algebraic relationship that expresses the third moment of junctional SR [Ca2+] in terms of the first and second moments. In simulated voltage-clamp protocols using 12-state CaRUs that respond to the dynamics of both subspace and junctional SR [Ca2+], this moment-closure approach to simulating local control of excitation-contraction coupling produces high-gain Ca2+ release that is graded with changes in membrane potential, a phenomenon not exhibited by common pool models. Benchmark simulations indicate that the moment-closure approach is nearly 10,000-times more computationally efficient than corresponding Monte Carlo simulations while leading to nearly identical results. We conclude by applying the moment-closure approach to study the restitution of Ca2+-induced Ca2+ release during simulated two-pulse voltage-clamp protocols.

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Year:  2008        PMID: 18487291      PMCID: PMC2483752          DOI: 10.1529/biophysj.107.125948

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  29 in total

1.  Modeling short-term interval-force relations in cardiac muscle.

Authors:  J J Rice; M S Jafri; R L Winslow
Journal:  Am J Physiol Heart Circ Physiol       Date:  2000-03       Impact factor: 4.733

2.  The sarcoplasmic reticulum and the control of muscle contraction.

Authors:  C Franzini-Armstrong
Journal:  FASEB J       Date:  1999-12       Impact factor: 5.191

3.  Reverse mode of the sarcoplasmic reticulum calcium pump and load-dependent cytosolic calcium decline in voltage-clamped cardiac ventricular myocytes.

Authors:  T R Shannon; K S Ginsburg; D M Bers
Journal:  Biophys J       Date:  2000-01       Impact factor: 4.033

4.  Termination of cardiac Ca(2+) sparks: an investigative mathematical model of calcium-induced calcium release.

Authors:  Eric A Sobie; Keith W Dilly; Jader dos Santos Cruz; W Jonathan Lederer; M Saleet Jafri
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

5.  Theory of excitation-contraction coupling in cardiac muscle.

Authors:  M D Stern
Journal:  Biophys J       Date:  1992-08       Impact factor: 4.033

6.  Luminal Ca2+ controls termination and refractory behavior of Ca2+-induced Ca2+ release in cardiac myocytes.

Authors:  Dmitry Terentyev; Serge Viatchenko-Karpinski; Héctor H Valdivia; Ariel L Escobar; Sandor Györke
Journal:  Circ Res       Date:  2002-09-06       Impact factor: 17.367

7.  Local control models of cardiac excitation-contraction coupling. A possible role for allosteric interactions between ryanodine receptors.

Authors:  M D Stern; L S Song; H Cheng; J S Sham; H T Yang; K R Boheler; E Ríos
Journal:  J Gen Physiol       Date:  1999-03       Impact factor: 4.086

8.  A mathematical model of cardiocyte Ca(2+) dynamics with a novel representation of sarcoplasmic reticular Ca(2+) control.

Authors:  S M Snyder; B M Palmer; R L Moore
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

9.  Modeling gain and gradedness of Ca2+ release in the functional unit of the cardiac diadic space.

Authors:  J J Rice; M S Jafri; R L Winslow
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

10.  An integrative model of the cardiac ventricular myocyte incorporating local control of Ca2+ release.

Authors:  Joseph L Greenstein; Raimond L Winslow
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

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  14 in total

1.  Dynamics of calcium sparks and calcium leak in the heart.

Authors:  George S B Williams; Aristide C Chikando; Hoang-Trong M Tuan; Eric A Sobie; W J Lederer; M Saleet Jafri
Journal:  Biophys J       Date:  2011-09-20       Impact factor: 4.033

2.  Ca2+ alternans in a cardiac myocyte model that uses moment equations to represent heterogeneous junctional SR Ca2+.

Authors:  Marco A Huertas; Gregory D Smith; Sándor Györke
Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

3.  Commentaries on viewpoint: The cardiac contraction cycle: is Ca2+ going local? Counterpoint.

Authors:  Hannes Reuter; William E Louch; Fabien Brette; James S K Sham; Hui Sun; Xiao-Ru Yang; Christian Soeller; Edward G Lakatta; Ravi C Balijepalli
Journal:  J Appl Physiol (1985)       Date:  2009-12

Review 4.  Models of cardiac excitation-contraction coupling in ventricular myocytes.

Authors:  George S B Williams; Gregory D Smith; Eric A Sobie; M Saleet Jafri
Journal:  Math Biosci       Date:  2010-03-25       Impact factor: 2.144

Review 5.  Decoding myocardial Ca²⁺ signals across multiple spatial scales: a role for sensitivity analysis.

Authors:  Young-Seon Lee; Ona Z Liu; Eric A Sobie
Journal:  J Mol Cell Cardiol       Date:  2012-09-28       Impact factor: 5.000

Review 6.  Dynamic local changes in sarcoplasmic reticulum calcium: physiological and pathophysiological roles.

Authors:  Eric A Sobie; W J Lederer
Journal:  J Mol Cell Cardiol       Date:  2011-07-13       Impact factor: 5.000

Review 7.  Integrative systems models of cardiac excitation-contraction coupling.

Authors:  Joseph L Greenstein; Raimond L Winslow
Journal:  Circ Res       Date:  2011-01-07       Impact factor: 17.367

8.  Spontaneous Ca2+ sparks and Ca2+ homeostasis in a minimal model of permeabilized ventricular myocytes.

Authors:  Jana M Hartman; Eric A Sobie; Gregory D Smith
Journal:  Am J Physiol Heart Circ Physiol       Date:  2010-09-17       Impact factor: 4.733

Review 9.  Nonlinear dynamics in cardiology.

Authors:  Trine Krogh-Madsen; David J Christini
Journal:  Annu Rev Biomed Eng       Date:  2012-04-18       Impact factor: 9.590

10.  A univariate model of calcium release in the dyadic cleft of cardiac myocytes.

Authors:  Junjie Fan; Zeyun Yu
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2009
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