| Literature DB >> 18483562 |
Werner Schmidt1, Norman Klopp, Thomas Illig, Jochen Graw.
Abstract
PURPOSE: The aim of the study was to characterize the underlying mutation in a consanguineous family having cataracts.Entities:
Mesh:
Substances:
Year: 2008 PMID: 18483562 PMCID: PMC2375854
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Primers used for polymerase chain reaciton.
| 62065 | TGCGCTGCCCAGAGGC | 50–61 ~700 | |
| 62066 | CACCCTGAGACCCTAAGCTCTCC | ||
| 62068 | CCCCTCACACTCACCTAGCCAC | 50–61 ~690 | |
| 62067 | CTTGATAATTTGGGCCTGCCC | ||
| MWG | CAGGGGCTGGTGTCACTGGTC | 52–63 ~600 | |
| MWG | TGGAGGGTTCCTGGGCAGC | ||
| 64912 | CACCCCTCTGTCAACAACC | 50–61 ~490, 550, 600, 680 | |
| 61952 | ATCACAACAAGGCAGGCAC | ||
| 61954 | AGATTTTAAAGGAGAAAAGTGGAAAAC | 45–56 ~580 | |
| 61955 | ACAGCAACCAGAAAACATCTGC | ||
| 61957 | TTTGTGTTGTTCTTGCCAACGC | 50–61 ~680 | |
| 61956 | CAAAATGGGAAATTGGTAGTGTTAAGC | ||
| 61958 | CCACCAGCTCAGCACCGC | 50–61 ~580 | |
| 61959 | CCAAATTAAGAAACAACAAAGGAGGAC | ||
| 62073 | CCATTCCTGAATTTCTTTCAGCAC | 50–61 ~680 | |
| 62074 | TGGACCACAAGGCCAGCC | ||
| Invitrogen | ATGGGCGACTGGAGCTTTC | 60–65 ~680 | |
| Invitrogen | ATCTCCAGCATGTTGAGCAGC | ||
| Invitrogen | TGGACTGCTTCATCTGCCAGGCC | 61–63 ~700 | |
| Invitrogen | CTAGATGGCCAAGTCCTCCGGTC | ||
| Invitrogen | CAGCCGGTGGCCCTGC | 51–62 ~700 | |
| Invitrogen | TCACTTCATACGGTTAGATCGTCTGAC | ||
| MWG | CTCGGGCAGGCTCTGCCAC | 57–64 ~250 | |
| 64918 | CGGAGATGGCGCATAGGGC | ||
| 64915 | CCCAGGCACTGTGACCATCC | 50–61 ~700 | |
| 62072 | CTTTCTTCATCTAGGGGCTGGC |
Primers used for amplification of lens cDNA of various genes by polymerase chain reaction (PCR).
Figure 1Cataracts in family D. A: Pedigree of family D indicates consanguinity in the second generation. The cataract appeared in the third generation and affects both children. The proband (III.2) is the younger daughter of the consanguineous parents. B: Ophthalmic details are given. On the left side, the healthy eye of the proband’s father (II.2) is given while on the right side, the slight embryonic nucleus opacity of her mother (II.3) is shown. Both were analyzed by a slit lamp. At the bottom, the triangular cataract of the proband (III.2) is seen immediately before the operation (using an operation microscope).
Figure 2GJA8 mutation in family D. Sequence analysis of GJA8 genomic DNA indicates heterozygosity after position 776 (red arrow) for the proband’s parents, II.2 and II.3 (A) and a homozygous insertion of a “G” at this position in the cDNA from the proband’s lens mRNA (B). C: The comparison of the wild type sequence (NM_005267) with the proband’s sequence (AD) demonstrates that the insertion of the G after position 776 leads to an altered open reading frame. The new amino acid sequence is indicated by red letters in a yellow box. Moreover the mutation causes a loss of the restriction site for BsrD1 but creates a new one (BstX1). In the cDNA sequence, the A of the ATG start codon is counted as #1 and in the amino-acid sequence, the first Met is counted as #1. D: The restriction digest using BstX1 in the members of the family demonstrates that homozygosity of the mutation is present only in both severely affected children. The other family members are heterozygous, independent of the slight nuclear opacity. A control person from outside (Contr) is homozygous wild type, since BstX1 cannot cut.