Literature DB >> 18480818

Crystal structure of squid rhodopsin.

Midori Murakami1, Tsutomu Kouyama.   

Abstract

Invertebrate phototransduction uses an inositol-1,4,5-trisphosphate signalling cascade in which photoactivated rhodopsin stimulates a G(q)-type G protein, that is, a class of G protein that stimulates membrane-bound phospholipase Cbeta. The same cascade is used by many G-protein-coupled receptors, indicating that invertebrate rhodopsin is a prototypical member. Here we report the crystal structure of squid (Todarodes pacificus) rhodopsin at 2.5 A resolution. Among seven transmembrane alpha-helices, helices V and VI extend into the cytoplasmic medium and, together with two cytoplasmic helices, they form a rigid protrusion from the membrane surface. This peculiar structure, which is not seen in bovine rhodopsin, seems to be crucial for the recognition of G(q)-type G proteins. The retinal Schiff base forms a hydrogen bond to Asn 87 or Tyr 111; it is far from the putative counterion Glu 180. In the crystal, a tight association is formed between the amino-terminal polypeptides of neighbouring monomers; this intermembrane dimerization may be responsible for the organization of hexagonally packed microvillar membranes in the photoreceptor rhabdom.

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Year:  2008        PMID: 18480818     DOI: 10.1038/nature06925

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  204 in total

1.  Structural basis for μ-opioid receptor binding and activation.

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Journal:  Structure       Date:  2011-11-09       Impact factor: 5.006

Review 2.  Melanopsin and mechanisms of non-visual ocular photoreception.

Authors:  Timothy Sexton; Ethan Buhr; Russell N Van Gelder
Journal:  J Biol Chem       Date:  2011-11-10       Impact factor: 5.157

3.  Structural insights into human GPCR protein OA1: a computational perspective.

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Journal:  J Mol Model       Date:  2011-09-22       Impact factor: 1.810

Review 4.  Chemistry and biology of vision.

Authors:  Krzysztof Palczewski
Journal:  J Biol Chem       Date:  2011-11-10       Impact factor: 5.157

Review 5.  The significance of G protein-coupled receptor crystallography for drug discovery.

Authors:  John A Salon; David T Lodowski; Krzysztof Palczewski
Journal:  Pharmacol Rev       Date:  2011-12       Impact factor: 25.468

Review 6.  New insights for drug design from the X-ray crystallographic structures of G-protein-coupled receptors.

Authors:  Kenneth A Jacobson; Stefano Costanzi
Journal:  Mol Pharmacol       Date:  2012-06-13       Impact factor: 4.436

Review 7.  Structures of membrane proteins.

Authors:  Kutti R Vinothkumar; Richard Henderson
Journal:  Q Rev Biophys       Date:  2010-02       Impact factor: 5.318

8.  Exploring the structure of opioid receptors with homology modeling based on single and multiple templates and subsequent docking: a comparative study.

Authors:  Indrani Bera; Aparna Laskar; Nanda Ghoshal
Journal:  J Mol Model       Date:  2010-07-27       Impact factor: 1.810

9.  Interactions between intracellular domains as key determinants of the quaternary structure and function of receptor heteromers.

Authors:  Gemma Navarro; Sergi Ferré; Arnau Cordomi; Estefania Moreno; Josefa Mallol; Vicent Casadó; Antoni Cortés; Hanne Hoffmann; Jordi Ortiz; Enric I Canela; Carme Lluís; Leonardo Pardo; Rafael Franco; Amina S Woods
Journal:  J Biol Chem       Date:  2010-06-18       Impact factor: 5.157

Review 10.  The photochemical determinants of color vision: revealing how opsins tune their chromophore's absorption wavelength.

Authors:  Wenjing Wang; James H Geiger; Babak Borhan
Journal:  Bioessays       Date:  2013-10-24       Impact factor: 4.345

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